Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mal7g3443 ATGAGTTACTCCTTTTATGACAAAATTTCCTCATCTGAGTTCAATCCCTCTTTGCATAATTTTGGAGCTTCCAATGGTGATTCTATTGGTGGGTTGTCATCATCACATTCATTGGTTTTGGAGAGTGGGAAGGAAAAGGTGGTGGCGTGCCCTGTTACTGAAAGTGTTGGTAAAGATGAGGTTTCTGAGGCCAAAGGTTTAGCTTCTTTGAAGAACCATAGGGAAGCAGAGAGGAGAAGGAGGGAGAGAATAAATGGTCATCTTGCAACATTACGTGGTCTTGTGGCTTCCAATGGTCAAAAGATGGACAAGGCGGCAATACTTGCTGAAGTGATTAGCCAAGTGAAGGAATTAAAGAAAAATGCATTTGAAGCAAGTAAAGGTTTTCTCATTCCAACAGAAGTTGATGAAGTGAAAGTTGAACCATATGATATTGAATTAGGATATGGATGCAAGTCTTACATTGCAACTATCTGTTGTGATTACCAACCTGAGGTGCTATGTGACCTCAAAAAAGCACTTGATGCACTTCAACTTCAACTAGTGAAGGCAGAAATGTCAACATTGGAAAGCAGGATGAAGAATGTGTTTGTCTTTACATGTTGCAAAGGGGATAATAGTGTTAATGTTGAGGCATGTCAAAGTATTGCAAATGTTGTTCACAAGGCACTGGATTCTGTGCTGGAAAAGGCTTCTACCTCAATGGAATTCTCACTTAGAACTTCATATCCAAACAAGAGGAGAAGAATGTGCTTTGTTGAAACATCTACCTCTTCATGCAACCATGGATCTTGTTGTTCATGCTAA 807 0.3978 MSYSFYDKISSSEFNPSLHNFGASNGDSIGGLSSSHSLVLESGKEKVVACPVTESVGKDEVSEAKGLASLKNHREAERRRRERINGHLATLRGLVASNGQKMDKAAILAEVISQVKELKKNAFEASKGFLIPTEVDEVKVEPYDIELGYGCKSYIATICCDYQPEVLCDLKKALDALQLQLVKAEMSTLESRMKNVFVFTCCKGDNSVNVEACQSIANVVHKALDSVLEKASTSMEFSLRTSYPNKRRRMCFVETSTSSCNHGSCCSC* 269
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mal7g3443 268 PANTHER TRANSCRIPTION FACTOR BHLH30 9 260 IPR045847 GO:0003700|GO:0006355
Mal7g3443 268 PANTHER DNA BINDING PROTEIN-LIKE 9 260 - -
Mal7g3443 268 SMART finulus 74 124 IPR011598 GO:0046983
Mal7g3443 268 SUPERFAMILY HLH, helix-loop-helix DNA-binding domain 71 120 IPR036638 GO:0046983
Mal7g3443 268 CDD ACT_UUR-ACR-like 157 224 - -
Mal7g3443 268 Gene3D - 65 127 IPR036638 GO:0046983
Mal7g3443 268 ProSiteProfiles Myc-type, basic helix-loop-helix (bHLH) domain profile. 68 118 IPR011598 GO:0046983
Mal7g3443 268 Pfam Helix-loop-helix DNA-binding domain 72 118 IPR011598 GO:0046983
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mal7g3443 Mal-Chr7 99489057 99491952 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mal7g3443 51 212 Basic Helix-Loop-Helix Transcription Factor Gene Family AT2G40200 40.000 3.39e-31 114
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bHLH Mal7g3443 HLH 8.8e-10 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mal7g3443 - - gmx:100804756 353.214
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mal7g3443 7 99489057 99491952 Mal7g3443 7 99489057 99491952 ECH