Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mal7g3422 ATGTCCGTTTTCGTTGTCACCGCCATGGATTTCGCCCTCCTCGGTTTTCTTGTTCCGTCGCTCTGGGAGATCGAAGTCGCTTTCGCTGCCTCGGTTTTCGTTATTCTCGCGTATTGGTTCTTCACGTTTAGAACCGGTGGCCACGACTCTGATCGATCGCTTTCGGAAAATTCCGCCGGTGATGCCGCCGACGATAAGATTGGCCAGTCCAGAGGAGATTCTCAAGCCGGTTCGGCATACCTGATTAAGTTAGAACTATTGGCTGCTAAAAATCTAATTGCTGCAAACTTAAATGGCACATCGGATCCTTATGTCATCATCACATGTGGCAATGAAAAGCGATTCAGTTCCATGGTCCCTGGTTCAAGAAACCCAATGTGGGGCGAAGAGTTCAATTTTTCTGTCGATGAACTTCCTGTCCAGATCAATGTCACAATTTTTGACTGGGATATAATTTGGAAAAGTACCGTTCTTGGTTCAGTGACTGTTCCAGTTGAAAGTGAAGGTCAAACTGGTGCACTGTGGCATACTTTGGATAGCCCATCAGGGCAGGTTTGTCTTCATATAAAAACAAAAAAACAATCTGCAAATTCTGCCAGGTTGAATGGTTATGGTGGAGCCAACACTCGAAGAAGAATACCCTTGGAAAAGCAGGGGCCCACTGTAGTCCATCAAAAGCCAGGACCTCTTCAAACAATATTTGAGCTTCATCCAGATGAGGTGGTTGATCATAGTTATTCTTGTGCGCTTGAAAGGTCATTCTTGTACCATGGTCGTATGTATGTCTCAACATGGCACATTTGTTTCCATTCCAATGTGTTCTCGAAACAAATGAAGGTGGTTATTCCATTTGAAGATATAGATGAGATTCGAAGGAGTCAACATGCATTTATTAATCCTGCTATAACAATTATTCTTCGTATGGGTGCTGGTGGACATGGTGTCCCTCCTTTGGGAAGTCCTGATGGTAGAGTCAGATATAAGTTTGCATCATTTTGGAACAGGAATCATGCATTTAGAAATCTACAACGTGCAGCAAAGAACTTCCGTGAAATGTTGGAAACTGAGAAGAAGGAAAGTGCAGAGTCAGAATTGCGTGCACATAGCAGTTCTGTCAGACGAAGTAACATAATGGATAAGGTTCCTGAATCCAGCATGCCAAAAGCTGGAAAACATAAAACTTTTACCAAAGAAGAGGCTTTAGTTGGTATATACAATGATGTTTTCCCCTGCACAGCTGAGCAGTTTTTTAACTTATTGTTAAAGGATGTTTTCCCCCGCAAGTATCGTTCACTACGAAAGGATACCAACCTCGTGATTGGGCCGTGGCATACAGCAGAAGAATATGACGGTCAAGTCAGAGATATAACCTTCAGAACCCTTTGTAACAGCCCTATGTGCCCTCCAGACACAGCCATGACAGAGTGGCAACATGTTGTTCTATCATCAGACAAGAAAAACCTGGTGTTTGAGACTGTGCAACAGGCACATGATGTTCCATTTGGGTCCTATTTTGAGGTGCACTGTAAATGGAGTTTGGAGACTACTAGTGACAGTTCATGTACTCTGGACATAAGAGTGGGTGCACATTTCAAGAAATGGTGTGTGATGCAATCCAAAATAAAGTCAGGGGCAATCAATGAGTACAAGAAAGAAGTTGATGTGATGTTAGATGTTGCTCGTTCATATATAAAGTCACATACCTCTGATGTCGAGATTGATAATAAATCTTCGCCCTCTGCGGAAACTTCGGAAAATTAA 1761 0.4287 MSVFVVTAMDFALLGFLVPSLWEIEVAFAASVFVILAYWFFTFRTGGHDSDRSLSENSAGDAADDKIGQSRGDSQAGSAYLIKLELLAAKNLIAANLNGTSDPYVIITCGNEKRFSSMVPGSRNPMWGEEFNFSVDELPVQINVTIFDWDIIWKSTVLGSVTVPVESEGQTGALWHTLDSPSGQVCLHIKTKKQSANSARLNGYGGANTRRRIPLEKQGPTVVHQKPGPLQTIFELHPDEVVDHSYSCALERSFLYHGRMYVSTWHICFHSNVFSKQMKVVIPFEDIDEIRRSQHAFINPAITIILRMGAGGHGVPPLGSPDGRVRYKFASFWNRNHAFRNLQRAAKNFREMLETEKKESAESELRAHSSSVRRSNIMDKVPESSMPKAGKHKTFTKEEALVGIYNDVFPCTAEQFFNLLLKDVFPRKYRSLRKDTNLVIGPWHTAEEYDGQVRDITFRTLCNSPMCPPDTAMTEWQHVVLSSDKKNLVFETVQQAHDVPFGSYFEVHCKWSLETTSDSSCTLDIRVGAHFKKWCVMQSKIKSGAINEYKKEVDVMLDVARSYIKSHTSDVEIDNKSSPSAETSEN* 587
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mal7g3422 586 Coils Coil 339 359 - -
Mal7g3422 586 Pfam C2 domain 83 177 IPR000008 -
Mal7g3422 586 Pfam GRAM domain 231 299 IPR004182 -
Mal7g3422 586 SMART gram2001c 228 294 IPR004182 -
Mal7g3422 586 SUPERFAMILY C2 domain (Calcium/lipid-binding domain, CaLB) 80 191 IPR035892 -
Mal7g3422 586 ProSiteProfiles C2 domain profile. 63 178 IPR000008 -
Mal7g3422 586 ProSiteProfiles VASt domain profile. 400 568 IPR031968 -
Mal7g3422 586 PANTHER BAG-ASSOCIATED GRAM PROTEIN 1 12 584 IPR044655 -
Mal7g3422 586 Pfam VAD1 Analog of StAR-related lipid transfer domain 404 547 IPR031968 -
Mal7g3422 586 SMART C2_3c 81 177 IPR000008 -
Mal7g3422 586 Gene3D - 229 348 IPR011993 -
Mal7g3422 586 Gene3D C2 domain 69 193 IPR035892 -
Mal7g3422 586 PRINTS C2 domain signature 121 134 IPR000008 -
Mal7g3422 586 PRINTS C2 domain signature 142 150 IPR000008 -
Mal7g3422 586 PRINTS C2 domain signature 97 109 IPR000008 -
Mal7g3422 586 CDD C2 82 178 - -
Mal7g3422 586 PANTHER BAG-ASSOCIATED GRAM PROTEIN 1 12 584 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mal7g3422 Mal-Chr7 99215315 99224859 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mal7g3422 81 166 C2H2 Transcription Factor Family AT4G21160 27.907 1.43e-07 52.0
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mal7g3422 - - gmx:100789923 974.541