Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mal7g3420 ATGAGTGAAGAAGGGGTAGATGTTAGAAAGATGATGGGACATAAAAGGAGCCCCTGCTCTGTTGATCAAAACAGTTATAATTCTATTGCATCTAAAAAGCAAAAGCCTGATTTGTCGATCAGCACTAAGGATAGGAAGGAAAAGATTGGCGAACGAATTGTCGCTCTTCAACAACTTGTTTCACCATATGGGAAGACAGATACATCTTCTGTTCTAAAGGAAGCGATGGACTACATAGAATTCCTTCATAAACAACTACTTAGCGCTCCTTACCTCGAAGCTGCACCAGCAACCCTACAGGATACAGAGGCATGCAGCCTGAGGAGTAGAGGGTTATGTCTTGTTCCTGTCTCATTTACTATTGGAGTTGCCGAGGGCAATGGTGCAGACATCTGGGCACCAATCAAGACCACTTCACCTAAATATGAGAAAGATGCATCGCAGTCGCAATTTCAGTGA 459 0.4336 MSEEGVDVRKMMGHKRSPCSVDQNSYNSIASKKQKPDLSISTKDRKEKIGERIVALQQLVSPYGKTDTSSVLKEAMDYIEFLHKQLLSAPYLEAAPATLQDTEACSLRSRGLCLVPVSFTIGVAEGNGADIWAPIKTTSPKYEKDASQSQFQ* 153
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mal7g3420 152 PANTHER TRANSCRIPTION FACTOR BHLH154 11 130 - -
Mal7g3420 152 SMART finulus 39 88 IPR011598 GO:0046983
Mal7g3420 152 PANTHER TRANSCRIPTION FACTOR BHLH83-RELATED 11 130 - -
Mal7g3420 152 CDD bHLH_AtbHLH_like 39 86 IPR045239 -
Mal7g3420 152 Gene3D - 31 101 IPR036638 GO:0046983
Mal7g3420 152 MobiDBLite consensus disorder prediction 1 16 - -
Mal7g3420 152 MobiDBLite consensus disorder prediction 18 36 - -
Mal7g3420 152 MobiDBLite consensus disorder prediction 1 44 - -
Mal7g3420 152 ProSiteProfiles Myc-type, basic helix-loop-helix (bHLH) domain profile. 33 82 IPR011598 GO:0046983
Mal7g3420 152 SUPERFAMILY HLH, helix-loop-helix DNA-binding domain 40 87 IPR036638 GO:0046983
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mal7g3420 Mal-Chr7 99205963 99208964 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mal7g3420 11 152 Basic Helix-Loop-Helix Transcription Factor Gene Family AT1G05710 51.190 1.16e-48 152
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mal7g3420 - - gmx:100809747 239.965