Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mal7g3403 ATGGGTTGTGTTGTTCCTTCAGAACTTAGTTTAGATTTAAGACCAAGTTTCGTTCCAAAAACCATCGCTAATTTCCTCTATCACCTTTCCACAATCCAAACCACCTCCGATAAACTCTCTAAACTCCATGATTTTCTCTCCAGACTCGAAGATGAACTCACTAAGATCGATGCTTTCAAACGTGAACTACCTCTCTCCATGCTCCTTTTAAACGACGCAATTTTAGTTTTGAAGGAGGAATTGGAAAAATGCAGAAGTAAGAATTGTGTACCAGTTTTGGAAGAGTTTATTCCTTTGAAGAAAGAGATTGATCAGAGTGAGGAAAATAATGATAATGATAGAAACAACAATAACAATGAATGCAGCAAAGATAAGAAGAATTGGATGAGTTCTGTTCAGCTATGGAACAACAACACAACAACCGCCACTAATAATAATGTTTCTGATCATCATAAACATAATCATAATCTTAATAAATTAGAAACCAAGAAAAGGGAAGAGGAAGGACATTCTGTGACTGTAGCTGAGGACCCTTTTCAATCTTGTAATAGTAATAGAAATGGAGGAAGTGCTTTTATGCCTTTTTCAACATATACTTCTGTTCCTGTGACAACAGTGACATTATCAGCACCTAAAGAAGAGAAGGAAGAACCTGTTAGGAATAGGCTCTCTTTTCTGACCCCTGAGGTGAAAAGTTTGAGGGAAGGATTTGGTTCGAGGGGTTCGAGAAGCATCTCTAACAGGGCAGTTTCATCGTCTCCTCCTACCGTGCAGCCGAGTTTGCGTGCTGCGCCACTTCAGCCACAGCAGACTTCTAGGAAGCAGAGGAGATGCTGGTCGCCGGAATTGCACCGGAGGTTTGTTAATGCGTTGCAGAAGCTTGGAGGTTCACAAGCAGCAACTCCAAAGCAAATTAGAGAACTCATGCAAGTTGATGGCCTGACAAATGATGAAGTGAAGAGCCATTTGCAAAAATACCGGCTTCATACGCGGAGAGTTCCAGCTGCAAGTGGTAGTAATGAGTCTGTTGTAGTTCTTGGAGGTTTATGGATGTCACAAGAATACAATGACTCTTCCAAAGGCAGCAGTACGGCATCTGGTTCTCCCCAAAGTCCACTTCATTTAGCTACAGGATCCAGGGGAGGGACATCGCCAACTGAAGGTGATAGCATGGAAGATGATGATGAAGATGAAAAATCTGAGAGTTATAGCTGGAAAAGTCATATTCAAAGACATGGAAAAGTTGGTGTATAG 1254 0.4131 MGCVVPSELSLDLRPSFVPKTIANFLYHLSTIQTTSDKLSKLHDFLSRLEDELTKIDAFKRELPLSMLLLNDAILVLKEELEKCRSKNCVPVLEEFIPLKKEIDQSEENNDNDRNNNNNECSKDKKNWMSSVQLWNNNTTTATNNNVSDHHKHNHNLNKLETKKREEEGHSVTVAEDPFQSCNSNRNGGSAFMPFSTYTSVPVTTVTLSAPKEEKEEPVRNRLSFLTPEVKSLREGFGSRGSRSISNRAVSSSPPTVQPSLRAAPLQPQQTSRKQRRCWSPELHRRFVNALQKLGGSQAATPKQIRELMQVDGLTNDEVKSHLQKYRLHTRRVPAASGSNESVVVLGGLWMSQEYNDSSKGSSTASGSPQSPLHLATGSRGGTSPTEGDSMEDDDEDEKSESYSWKSHIQRHGKVGV* 418
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mal7g3403 417 MobiDBLite consensus disorder prediction 239 276 - -
Mal7g3403 417 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 271 331 IPR017930 -
Mal7g3403 417 SUPERFAMILY Homeodomain-like 271 332 IPR009057 -
Mal7g3403 417 MobiDBLite consensus disorder prediction 356 386 - -
Mal7g3403 417 PANTHER TRANSCRIPTION FACTOR HHO6 8 410 - -
Mal7g3403 417 TIGRFAM myb_SHAQKYF: myb-like DNA-binding domain, SHAQKYF class 274 329 IPR006447 GO:0003677
Mal7g3403 417 MobiDBLite consensus disorder prediction 104 125 - -
Mal7g3403 417 Gene3D - 273 331 - -
Mal7g3403 417 Pfam Myb-like DNA-binding domain 276 327 IPR001005 -
Mal7g3403 417 MobiDBLite consensus disorder prediction 104 121 - -
Mal7g3403 417 MobiDBLite consensus disorder prediction 356 417 - -
Mal7g3403 417 PANTHER MYB FAMILY TRANSCRIPTION FACTOR 8 410 IPR044787 GO:0003700|GO:0006355
Mal7g3403 417 MobiDBLite consensus disorder prediction 233 279 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mal7g3403 Mal-Chr7 98948506 98950948 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mal7g3403 7 364 G2-like Transcription Factor Family AT2G03500 40.267 4.19e-66 215
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF GARP-G2-like Mal7g3403 Myb_DNA-binding 3.8e-07 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mal7g3403 - - mtr:MTR_4g086835 667.922
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mal7g3403 7 98948506 98950948 Mal7g3403 7 98948506 98950948 ECH