Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mal7g3347 ATGGCTAACCCAAGTGGCAATTCTACACAAACAATGTCGTTGAACTCCATGGAACAGAAGGGGAAAAATATTACTGAATCTAATGCAAGCATAATTCAGTGTCCTTTAAGCCAGCAGCATTGTAACTCCTTATATGGTCCAGTAGCTATCCTTTGGGATATTGAAAATTGTCCTGTTCCAAGTGATGTACGCCCAGAAGATGTGGCAGGTAATATAAGAATGGCTCTGCAGGTGCACCCAGTAATTAAAGGAGCTGTTACGACGTTTTCTGCTTATGGAGATTTCAATTCTTTCCCAAGGCGACTTAGAGAGGGCTGTCAGAGAACTGGTGTTAAACTCATTGATGTTCCCAATGGGAGAAAAGATGCTGCTGACAAAGCAATCTTGGTTGACATGTTCTTATTTGCTCTTGACAATCCTCCACCGTCCTCTATCATGTTAATCTCTGGAGACGTTGATTTTGCTCCAGCGCTCCACATTCTTGGTCAACGGGGATACACTGTAATTCTTGTCATCCCTGCTGGGGTTGGTGTTTCTTCTGCCCTATGCAATGCTGGTAAATTTGTCTGGGACTGGCCTATTGTGGTTCGTGGAGAGGGTTTCGTCCCCCCCGCAAAGGCTTTGGTGGCACCCCGTGGCGGTTCAGTTGAGCTTGCTGGATATTTGATGGGATGCCATATCAATGACAGCACTGATGGACAAAATGAAGAAGAAGCAATAGTTTATAGAGGGATGTCACAGAGCTATTACAACTCAAGGGAATTCTCAATGGTATCACAATCTCTGTCTGAATATAACTCACCATACATGTCTTACTTGCCAACATCTGTGAGATCTTATAGCCTTCCATCTGGATTGAATGATGTTGCTGGAGGACCTATTCCTTCTAGCGACAATACTGAATGCCAGATGTGGGTACAGCCTGGGGATTTAAATGGTCTCAAGGGTCAGCTGGTAAGGTTGCTCGAACTTTCTGGAGGATGCGTGCCCCTTGTCCGAGTTCCAGCAGAGTACCAGAAAATTTATGGTAAGACACTTTTTATATCTGATTATGGGGCATTCAAGTTGGTTGATCTTTTCAAAAAAATGGATGATGCTATTTCTGTGGAAGGGAAAGGGGCTCGCCGATTTGTGTATCTCAAAAACAGGAAGGGAGGCCCAAGTGCTCCTCCGATGTCTCTTGCAAAGAAAGATAAGAAAGGAAAAAAGGCACTGGAAGAGAATGCAAATGTTGTCATTGGTAGCTGCTCTTCGGATGAGTTGTCAGATGAAGAAAGAGTTGTCGTAGAACAACATGATGAAAGAAGTTTTACAGGAAAGGGTAATAAGGGGAGAGCAGCCAGATGTGAAATTGATGACCGTGTTCTTGAACAGTTTAAGTGTGAGCTGCAGGAGATTCTGGTCAGCTATTCCTGTCGGATACTTCTAAGTTGTTTTGAGGCTGTATACCAGCAACGATACAAGAGGGAGTTGGAATATCAGAGATTTGGTGTGGATAAGTTGGAGGATTTGTTGGAGAAAGTGAGTGATGTGGTAGTATTGCACGAGGAACCAGTAAGTAAGAGGAAATTCCTGGCTGCTGTCGGTTTTTAG 1593 0.4388 MANPSGNSTQTMSLNSMEQKGKNITESNASIIQCPLSQQHCNSLYGPVAILWDIENCPVPSDVRPEDVAGNIRMALQVHPVIKGAVTTFSAYGDFNSFPRRLREGCQRTGVKLIDVPNGRKDAADKAILVDMFLFALDNPPPSSIMLISGDVDFAPALHILGQRGYTVILVIPAGVGVSSALCNAGKFVWDWPIVVRGEGFVPPAKALVAPRGGSVELAGYLMGCHINDSTDGQNEEEAIVYRGMSQSYYNSREFSMVSQSLSEYNSPYMSYLPTSVRSYSLPSGLNDVAGGPIPSSDNTECQMWVQPGDLNGLKGQLVRLLELSGGCVPLVRVPAEYQKIYGKTLFISDYGAFKLVDLFKKMDDAISVEGKGARRFVYLKNRKGGPSAPPMSLAKKDKKGKKALEENANVVIGSCSSDELSDEERVVVEQHDERSFTGKGNKGRAARCEIDDRVLEQFKCELQEILVSYSCRILLSCFEAVYQQRYKRELEYQRFGVDKLEDLLEKVSDVVVLHEEPVSKRKFLAAVGF* 531
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mal7g3347 530 PANTHER - 34 525 - -
Mal7g3347 530 CDD LOTUS 456 518 - -
Mal7g3347 530 CDD PIN_limkain_b1_N_like 47 173 - -
Mal7g3347 530 Pfam OST-HTH/LOTUS domain 455 518 IPR025605 -
Mal7g3347 530 Pfam OST-HTH/LOTUS domain 312 377 IPR025605 -
Mal7g3347 530 Pfam NYN domain 47 187 IPR021139 GO:0004540
Mal7g3347 530 ProSiteProfiles OST-type HTH domain profile. 310 382 IPR025605 -
Mal7g3347 530 PANTHER LIMKAIN B LKAP 34 525 IPR024768 GO:0005777|GO:0010468|GO:1903231
Mal7g3347 530 CDD LOTUS 311 380 - -
Mal7g3347 530 Gene3D - 451 522 IPR041966 -
Mal7g3347 530 Gene3D - 309 380 IPR041966 -
Mal7g3347 530 ProSiteProfiles OST-type HTH domain profile. 455 529 IPR025605 -
Mal7g3347 530 Gene3D - 45 192 - -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mal7g3347 36 198 C2H2 Transcription Factor Family AT5G61190 39.877 9.41e-29 119
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mal7g3347 - - gmx:100818186 874.389
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mal7g3347 7 98229912 98231504 Mal7g3347 7 98229912 98231504 ECH