Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mal7g3317 ATGAGGAAGCCCTGTGATATCAAATTAGACAAGAACAAAGGAACATGGTCCAAACAAGAGGACCAGAAACTCATAGATTATATCAACAAACACGGTGAGGTTTGTTGGAGTACACTCCCTCAAGCTGCAGGTTTACTTCGGTGTGGTAAAAGTTGTAGGCTGAGATGGATGAACTATCTACGACCAGACCTTAAAAGAGGCAACTTTGCTGAAGATGAAGAAGATCTCATCATCAAGCTTCATGCACTTCTAGGCAACCGGTGGTCACTAATTGCTGGGAGATTGCCTGGACGTACTGATAATGAAGTGAAGAACTTTTGGAACTCTCATATAAGAAAAAAGTTGATTAGGAAGGGTATTGATCCAAATAATCATGGTTTAAACTACAAAATCCCTCCCCTTCAAAACCCAATCATGTCTAATAGTTCAAAATCTTTTTGCTTGAAAGACATTATTAGGAAGAATGAGACAAGTAAAACCCATGTTCAAAATGGTGAAGTACTCTCGAATGCTCCAAGAGGCAAGGATGAGTCATATGCCCTATTATTGGATTTAAACCTTGATCTCTCACTATGA 576 0.3924 MRKPCDIKLDKNKGTWSKQEDQKLIDYINKHGEVCWSTLPQAAGLLRCGKSCRLRWMNYLRPDLKRGNFAEDEEDLIIKLHALLGNRWSLIAGRLPGRTDNEVKNFWNSHIRKKLIRKGIDPNNHGLNYKIPPLQNPIMSNSSKSFCLKDIIRKNETSKTHVQNGEVLSNAPRGKDESYALLLDLNLDLSL* 192
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mal7g3317 191 Pfam Myb-like DNA-binding domain 13 60 IPR001005 -
Mal7g3317 191 Pfam Myb-like DNA-binding domain 66 110 IPR001005 -
Mal7g3317 191 SUPERFAMILY Homeodomain-like 10 107 IPR009057 -
Mal7g3317 191 Gene3D - 8 65 - -
Mal7g3317 191 CDD SANT 68 111 IPR001005 -
Mal7g3317 191 Gene3D - 67 129 - -
Mal7g3317 191 CDD SANT 15 60 IPR001005 -
Mal7g3317 191 ProSiteProfiles Myb-like domain profile. 61 111 IPR001005 -
Mal7g3317 191 PANTHER TRANSCRIPTION FACTOR MYB8-RELATED-RELATED 2 190 - -
Mal7g3317 191 SMART sant 12 62 IPR001005 -
Mal7g3317 191 SMART sant 65 113 IPR001005 -
Mal7g3317 191 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 61 115 IPR017930 -
Mal7g3317 191 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 8 60 IPR017930 -
Mal7g3317 191 PANTHER - 2 190 - -
Mal7g3317 191 ProSiteProfiles Myb-like domain profile. 8 60 IPR001005 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mal7g3317 Mal-Chr7 97862427 97863934 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mal7g3317 2 182 MYB Transcription Factor Family AT4G38620 56.757 5.20e-69 210
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB Mal7g3317 Myb_DNA-binding 1.3e-14 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mal7g3317 K09422 - gmx:100818783 272.707