Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mal7g3303 ATGGAACATTATAGACACGATGCACACGTCGATATGCCAGAAATTGCTAGGCGTGCGATGAGAGTGTTGCCACCTTTTAAAACCTTTAATAGAGAGCAAGCTGATGATTGTCCTATCTGCATGGAAGAATTTAAGAAAGGGGAGTTGATTCAACCTTTTGGTTTGTGTGCTCATGAATTTCATTCATCATGCCTCAATTCTTGGTTACTTGGAGGAAAAACAACTTGCCCGATTTGTCGTCAAGATTTGTCAACTACGGTATGTACTTCTAGAGGCACATAG 282 0.4078 MEHYRHDAHVDMPEIARRAMRVLPPFKTFNREQADDCPICMEEFKKGELIQPFGLCAHEFHSSCLNSWLLGGKTTCPICRQDLSTTVCTSRGT* 94
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mal7g3303 93 PANTHER RING-H2 FINGER PROTEIN ATL61-RELATED-RELATED 15 84 - -
Mal7g3303 93 Pfam Ring finger domain 35 80 IPR001841 -
Mal7g3303 93 SMART ring_2 37 79 IPR001841 -
Mal7g3303 93 SUPERFAMILY RING/U-box 36 85 - -
Mal7g3303 93 ProSiteProfiles Zinc finger RING-type profile. 37 80 IPR001841 -
Mal7g3303 93 PANTHER OS06G0666500 PROTEIN 15 84 - -
Mal7g3303 93 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 1 86 IPR013083 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mal7g3303 Mal-Chr7 97643275 97643556 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mal7g3303 15 86 C3H Transcription Factor Family AT1G22670 33.766 5.30e-12 58.2
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mal7g3303 - K15692 aprc:113865236 117.087