Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mal7g3302 ATGTCTTCAAATGAGATCACGAAAATGGAAGAAGGTGATCTTAAGGCACAAACAAAAAGGGAATCTGCAGGGTTTTGCGGTTCTCCTGAGGTAGTTCAAATCATACAAAAGGTAATAGCAGAGGTGATAGGAACATACTTCTTAATATTTGCAGGGTGTTGTGTAGTGGTTCTGAATAAAGTGGAAGAGACTAAAGGAACAATAACATTTCCTGGAATTTGTGTAACATGGGGTTTATCAGTTATGATCTTAGTTTATTCTCTTGGTCACATCTCTGGTGCCCATTTCAATCCTGCTGTCACCGTTAGCTTCGCAATCTATCGTCATTTCCCGCTTAAACAGGTACCATTGTATCTTGTTGCACAGGTGCTAGGATCTGTCCTTGCTAGTGGAACATTGTACCTTCTTTTTGATGTAGATGAAACATCTTTTTTCGGAACAGTACCAGCAGGATCTAATGTTCAATCTCTTGTCTTTGAGATACTCACATCATTTCTCTTGATGTTTGTTGTATCTGCAGTTTCCACAGACAATAGAGCGATTGGAGAATTGGCAGGGATTGCTGTTGGCATGACAATCGTAGTAGACGTCTTCATTGCTGGGCCTGTGTCAGGTGCATCTATGAACCCAGCTAGAACTTTTGGGCCTGCTGTAGTGATGCACATTTACAAGGGATTCTGGGTTTATATACTTGGACCCTTTCTTGGTGCCATATTAGGTGCCTCAGCTTACAACCTGATTAGATTCACTGATAAGCCACTCAGAGAATTAAGCCAAAGCTCAAGCTTCCTCAAAAGTGTCTCTAGAGCAAGTTTTCGGTAG 822 0.4136 MSSNEITKMEEGDLKAQTKRESAGFCGSPEVVQIIQKVIAEVIGTYFLIFAGCCVVVLNKVEETKGTITFPGICVTWGLSVMILVYSLGHISGAHFNPAVTVSFAIYRHFPLKQVPLYLVAQVLGSVLASGTLYLLFDVDETSFFGTVPAGSNVQSLVFEILTSFLLMFVVSAVSTDNRAIGELAGIAVGMTIVVDVFIAGPVSGASMNPARTFGPAVVMHIYKGFWVYILGPFLGAILGASAYNLIRFTDKPLRELSQSSSFLKSVSRASFR* 274
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mal7g3302 273 PANTHER AQUAPORIN NIP2-1 8 269 IPR034294 -
Mal7g3302 273 ProSitePatterns MIP family signature. 95 103 IPR022357 -
Mal7g3302 273 PRINTS Major intrinsic protein family signature 36 55 IPR000425 GO:0015267|GO:0016020|GO:0055085
Mal7g3302 273 PRINTS Major intrinsic protein family signature 77 101 IPR000425 GO:0015267|GO:0016020|GO:0055085
Mal7g3302 273 PRINTS Major intrinsic protein family signature 114 133 IPR000425 GO:0015267|GO:0016020|GO:0055085
Mal7g3302 273 PRINTS Major intrinsic protein family signature 190 212 IPR000425 GO:0015267|GO:0016020|GO:0055085
Mal7g3302 273 PRINTS Major intrinsic protein family signature 159 177 IPR000425 GO:0015267|GO:0016020|GO:0055085
Mal7g3302 273 PRINTS Major intrinsic protein family signature 227 247 IPR000425 GO:0015267|GO:0016020|GO:0055085
Mal7g3302 273 PANTHER AQUAPORIN NIP4-1 8 269 - -
Mal7g3302 273 SUPERFAMILY Aquaporin-like 33 257 IPR023271 -
Mal7g3302 273 TIGRFAM MIP: MIP family channel proteins 40 244 IPR000425 GO:0015267|GO:0016020|GO:0055085
Mal7g3302 273 Gene3D Glycerol uptake facilitator protein. 2 261 IPR023271 -
Mal7g3302 273 CDD MIP 36 247 IPR000425 GO:0015267|GO:0016020|GO:0055085
Mal7g3302 273 Pfam Major intrinsic protein 32 244 IPR000425 GO:0015267|GO:0016020|GO:0055085
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mal7g3302 Mal-Chr7 97640387 97642018 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mal7g3302 1 269 Major Intrinsic Protein MIP AT5G37820 61.338 4.40e-120 344
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mal7g3302 K09874 - gmx:100819179 385.956