Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mal7g3300 ATGACTAGAAAAAAGGTTAAACTCGCATTCATAACCAACGACTCTTCAAGGAAGGCAACATTCAAGAAAAGGAAGAAAGGTCTAATGAAAAAGGTTAGTGAACTTAGCACCCTTTGTGGAATTGATGCTTGTGCTATAATTTATAGTCCTTATGATCCTCAACCAGAGGTTTGGCCATCTCAATTGGGAGTCCAAAGGGTGCTTAACAAGTTTAGAAAAATGCCTGAATTGGAACAAAGCAAAAAGACGGTGAATCAAGAGAGTTTTCTAAGACAGAGAATCCAAAAGGCGAAAGAGCAATTGACAAAACAAAGGAAAGATAATAGAGAAAAGGAAATGACCCATCTCATGTTTCAATGTCTTTGTGCAGGTGAACTTATGGACAATATTAGTATGGTTGATTTAAATGATATGGCATGGTTGATTGATCAATACTTGAAAGAGATTAATAGAAGGGTTGAAATGTTGACCAAAAAATCTCAAGGTCAAATTCAAATGGCACCACCACCAATGGTGACTAATATTGGAGTAGCTAAGATTGAAGATAATGCTCAAGGGAGTCATTGTGGTCAAGGGTTGGATATGAACATGGATGTTATGCAAAAGCAACATTGGTTTATGAATTTGATGGGTGGTGGTGATGGGAATGACAAACCTTCTTTGGGAGATGTTTGTCAACAAAATGGATTTTGGCCAAACCCATTTTTCCATTGA 714 0.3711 MTRKKVKLAFITNDSSRKATFKKRKKGLMKKVSELSTLCGIDACAIIYSPYDPQPEVWPSQLGVQRVLNKFRKMPELEQSKKTVNQESFLRQRIQKAKEQLTKQRKDNREKEMTHLMFQCLCAGELMDNISMVDLNDMAWLIDQYLKEINRRVEMLTKKSQGQIQMAPPPMVTNIGVAKIEDNAQGSHCGQGLDMNMDVMQKQHWFMNLMGGGDGNDKPSLGDVCQQNGFWPNPFFH* 238
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mal7g3300 237 PANTHER AGAMOUS-LIKE MADS-BOX PROTEIN AGL80 1 201 - -
Mal7g3300 237 SUPERFAMILY SRF-like 2 95 IPR036879 GO:0003677|GO:0046983
Mal7g3300 237 Pfam SRF-type transcription factor (DNA-binding and dimerisation domain) 10 51 IPR002100 GO:0003677|GO:0046983
Mal7g3300 237 ProSiteProfiles MADS-box domain profile. 1 49 IPR002100 GO:0003677|GO:0046983
Mal7g3300 237 PRINTS MADS domain signature 3 23 IPR002100 GO:0003677|GO:0046983
Mal7g3300 237 PRINTS MADS domain signature 23 38 IPR002100 GO:0003677|GO:0046983
Mal7g3300 237 SMART madsneu2 1 60 IPR002100 GO:0003677|GO:0046983
Mal7g3300 237 PANTHER SERUM RESPONSE FACTOR HOMOLOG 1 201 - -
Mal7g3300 237 CDD MADS_SRF_like 2 85 IPR033897 GO:0000981|GO:0000987|GO:0045944
Mal7g3300 237 Coils Coil 87 114 - -
Mal7g3300 237 Gene3D - 13 98 IPR036879 GO:0003677|GO:0046983
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mal7g3300 Mal-Chr7 97544545 97545258 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mal7g3300 1 156 Type I MADS-box Gene Family AT5G48670 69.231 7.58e-69 213
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MADS-M-type Mal7g3300 SRF-TF 3.6e-19 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mal7g3300 - - gmx:100813231 367.081