Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mal7g3299 ATGGCAGTTTTACCTACAAGTTCCTCCAGCTTGGAATTGACCATATCTATCCCAGGTTTTGCTTCTTCACCAATCACTTTTCTCCCCTCATCATCTGTGAAAAAGTTGGATATGAACCGAGTAGCCATGGAAGAAGAATGGATGACACTAGAAGATGAAGAAGAAAGCAGCGTTAATGAAGACAGTACTCCTAGAAAGAAACTGCGTCTAACAAAGGAACAGTCCCGTCTCCTTGAAGAAAGCTTCAGAAAAAACCACACTTTAAACCCAAAGCAGAAAGAGGGTTTGGCAATGCAGCTGAAGCTCCGACCAAGGCAAGTGGAGGTGTGGTTTCAAAATCGTAGGGCCAGGAGCAAGTTGAAGCAGACAGAGATGGAGTGTGAATACCTAAAGAGGTGGTTTGGGTCTTTGACAGAACAGAACCGTAGACTACAAAGAGAAGTTGAAGAACTTAGGGCAATGAAAGTGGGTCCACCCACTGTGTTATCCCCTCACAGCTCCGAGCCACTTCCAGCTTCAACCTTATCTATGTGCCCCCGATGTGAACGTGTCACCACCAACAACGCCGCCGCAGCCACCGCCGACAAATTAGTCAGCGACGCCGTCACTTTGTCCCCTAAAGTGTGA 627 0.4721 MAVLPTSSSSLELTISIPGFASSPITFLPSSSVKKLDMNRVAMEEEWMTLEDEEESSVNEDSTPRKKLRLTKEQSRLLEESFRKNHTLNPKQKEGLAMQLKLRPRQVEVWFQNRRARSKLKQTEMECEYLKRWFGSLTEQNRRLQREVEELRAMKVGPPTVLSPHSSEPLPASTLSMCPRCERVTTNNAAAATADKLVSDAVTLSPKV* 209
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mal7g3299 208 Gene3D - 56 128 - -
Mal7g3299 208 Coils Coil 134 154 - -
Mal7g3299 208 MobiDBLite consensus disorder prediction 51 72 - -
Mal7g3299 208 ProSitePatterns 'Homeobox' domain signature. 96 119 IPR017970 GO:0000981|GO:0006355
Mal7g3299 208 SUPERFAMILY Homeodomain-like 54 122 IPR009057 -
Mal7g3299 208 SMART halz 121 164 IPR003106 GO:0006355|GO:0043565
Mal7g3299 208 ProSiteProfiles 'Homeobox' domain profile. 61 121 IPR001356 GO:0003677
Mal7g3299 208 SMART HOX_1 63 125 IPR001356 GO:0003677
Mal7g3299 208 Pfam Homeobox associated leucine zipper 121 155 IPR003106 GO:0006355|GO:0043565
Mal7g3299 208 CDD homeodomain 64 122 IPR001356 GO:0003677
Mal7g3299 208 PANTHER - 1 195 - -
Mal7g3299 208 Pfam Homeodomain 65 119 IPR001356 GO:0003677
Mal7g3299 208 PANTHER HOMEOBOX-LEUCINE ZIPPER PROTEIN ATHB-17 1 195 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mal7g3299 Mal-Chr7 97530841 97534160 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mal7g3299 33 198 Homeobox Transcription Factor Family AT1G70920 57.955 1.76e-55 172
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF HB-HD-ZIP Mal7g3299 Homeodomain 2.6e-17 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mal7g3299 K09338 - gmx:100775341 308.145