Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mal7g3278 ATGGAGATTTTAGGTCTTATCAGACTTCGTATCAAAAAAGGCACTAATCTCATACCTCGTGATTCTCGTACCAGTGACCCTTATGTTCTTGTCACCATGGCTGAACAGACACTGAAGACTGCTGTTGTGAAAGATAACTGTCATCCTGAATGGAATGAAGAACTCACACTTTATATTAAAGATGTTAACACACCAATACATCTGATAGTTTGTGACAAAGACACTTTCACTGTGGACGACAAAATGGGCGAAGCAGACATAGACATAAAACCATATCTTCAGTGTGTGAAGATGGGGTTGAGCGACCTCCCAGATGGACATGTAGTCAAGACGGTTAAACCGGATACGACTAACTGTCTCGCTGAAGAGAGTAGCTGCATATGGAGAAATGGAAAAGTCGTCCAAGAAATGAGTTTAAGATTGAGAAATGTTGAGTCTGGTGAAGTACTCGTCGAAATTGAGTGGATTGATGTTACAGATTCTAAATGCAAAGGCTTATCTGAGGTTGAGTTTTAG 516 0.405 MEILGLIRLRIKKGTNLIPRDSRTSDPYVLVTMAEQTLKTAVVKDNCHPEWNEELTLYIKDVNTPIHLIVCDKDTFTVDDKMGEADIDIKPYLQCVKMGLSDLPDGHVVKTVKPDTTNCLAEESSCIWRNGKVVQEMSLRLRNVESGEVLVEIEWIDVTDSKCKGLSEVEF* 172
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mal7g3278 171 Gene3D C2 domain 4 168 IPR035892 -
Mal7g3278 171 SUPERFAMILY C2 domain (Calcium/lipid-binding domain, CaLB) 4 156 IPR035892 -
Mal7g3278 171 ProSiteProfiles C2 domain profile. 1 102 IPR000008 -
Mal7g3278 171 SMART C2_3c 6 101 IPR000008 -
Mal7g3278 171 PANTHER PROTEIN C2-DOMAIN ABA-RELATED 4 2 170 IPR044562 -
Mal7g3278 171 Pfam C2 domain 6 91 IPR000008 -
Mal7g3278 171 PANTHER CALCIUM-DEPENDENT LIPID-BINDING (CALB DOMAIN) FAMILY PROTEIN 2 170 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mal7g3278 Mal-Chr7 97069292 97070455 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mal7g3278 38 167 C2H2 Transcription Factor Family AT1G70790 56.818 8.42e-48 150