Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mal7g3239 ATGGAAAGAAGCGGTTTCAGAAACACAACCGGCGGCCATAACCGCAACGGTAATGGCGGTGGTGGTAGGGGTAATGGTGGTGGTGGCAGAGGAAGAGGAAGAGACTTTCACCAGCAACCCCAATCAAGTCCCGGTGGTCGTGGTCGAGGGTTTCCTCAACCATCGCAAAACCGTTGGCAACAAAGGCCACCTTCTTCTTCTTTCCCTCAGAGTTCATCTTCAACTGCTCCTCCTCCGATCACCAAACCCAACATCGACCATCAACCTCCTCAAGTTCAAACTCGTCCACTTCCAGACATTGGAGCTCTGAAAATAAAAGAGCAGCCTGTGGAAAATACCGTAATCGGACCCATATTCCGGCCTGACAAGGGAGGGACAATGTCAATTCGAGACTGCAGACTTCGTGTGAATCATTTTCCGGTTACCTTCAATCCACAAAGCATCATCATGCACTATGATGTGGATGTGAAGGCTACTTTGCCACCGAAAAAGGGTTTGCCTCCGAAGAAGATTTCCAAGTCTGACTTGTCTATGATCAGGGACAAATTGTCTGCTGATCATCCTCAGATACTGCCTTTGTTGAAAACTGCTTATGATGGAGAAAAAAACATCTTTAGTGCTGTGCCATTGCCTGAAGAAACTTTTACTGTGGAGGTCTCGAAAGGAGAAGATGAAAGAGCTGTTTCTTATACAGTTACTATAACCCTGGTGAACAAACTTGAGCTTCGAAAGTTGAGAGATTACCTTAGTGGCAGAGTGTATTCCATTCCGAGGGATATTTTACAGGGAATGGACTTAGTGGTGAAGGAGAATCCGGCAAGGCGCACGGTTTCTTTAGGACGATGTTTCTTTCCCACCAATCCTCCCTTGATGCAAAGGGATCTTGAACCCGGGATAATTGCACTTGGAGGGTTTCAACATAGTCTCAAGACCACGGCTCAGGGCTTATCTTTGTGTCTTGACTATTCAGTTTTGTCTTTTCGAAAGAAAATGTCGGTCTTGGATTTCCTCCATGATCATATAAGAGGTTTCAATTTGGCTGAGTTCAGGAAATATAAGAAAGATGTCGAGGAGGTACTCTTGGGATTGAAAGTAAATGTCACTCACAGAAGAACCAAACAGAAATACACCATTGCTAGGTTAACACCTAACGATACACGCCACATCACTTTCCCTATTTTGGACCAAGAGGGCCAAAACCCCCCTAGAAGCACCTCTCTTCTTGCCTACTTTAAAGATAAATATGACTATGATATTAAATACAAAGATATTCCTGCCTTGGATTTTGGGCGAAACAAGACTAATTTCGTGCCTATGGAGCTATGCGTCTTGGTTGAGGGTCAGAGATTTCCCAAAGAGTATTTGGACAAGAATGCTGCCAAGAACTTGAAAAATATGTGCTTGGCTAGTCCGAGGGACAGGGAATCTACAATACAAATGATGATGAAATCCGGTGATGGACCGTGCGGCGGTGGTATTCTTCAGAATTTTGGAATGAATGTCAACACTTCCATGACAAATGTGACCGGACGTGTAATTGGGCCTCCAATGTTGAAGTTAGGCGATCCACGTGGAAAGAGTGCTCCTATGAAACTGGATCCAGAGAAATGCCATTGGAATCTAGTTGGAAAGTCAATGGTAGAAGGAAAAGCTGTTGAATGTTGGGGAATCCTTGATTTTACCAGCAATGAACGTAATAATTGGTACAAATTAAGAGGCAATCAGTTCGTTAACAATCTCATGGATAAGTACAGAAAGTTGGGCATTCACATGGACGAACCTGTTTTGCACGAGTATTCTGCAATGTGGAAACTTGGGGATTCCAATTTACTATGTGAAATACTTGAAAAAATAAATGATAAGGTTCAAAAAAAATGTCGGCGGCGGCTGCAATTTCTTCTTTGTGTGATGGCATACAAGGATCCAGGTTACAAGTCCCTCAAGTGGATTGCTGAGACTAAGGTTGGCATAGTGACACAGTGCTGCTTATCTCCTAGTGCTAATGAAGGGAAAGACCAATATCTCACAAATCTTTCGCTGAAAATCAATGCAAAAATTGGAGGCAGTAACGTAGAGCTCATTAATAGGCTCCCACACTTTGAGGATGAAAGTCATGTTATGTTTATAGGGGCTGATGTCAATCATCCAGGTTCTCGGGACATAAATAGTCCATCAATTGCTGCAGTGGTTGCCACTACTAACTGGCCAGCTGCAAATCGCTATGCAGCACGTGTTTACGCTCAAGAGCATCGAGTGGAGAAAATCTTGAATTTTGGAGAGATTTGCCTTGACCTTGTTGCACATTATGAGAAATTGAACAAAGCCAGGCCCCAAAAAATTGTTATCTTTCGTGATGGTGTTAGTGAGAGCCAATTTCACATGGTTCTTGGCGAGGAGTTGAAAGATTTGAAAACTGTATTTCAGCACTCAAATTACTTTCCAACTATCACTCTTATTGTAGCTCAAAAGCGACATCAAACTCGATTGTTTCCTACAGGTGCGAAAGAGGGGACTCCTAATGGAAATGTGTTCCCTGGAACAGTTGTGGACACAAAGGTCGTACATCCTTTTGAATTCGACTTTTACCTCTGTAGTCACTATGGAAGCCTAGGTACAAGCAAGCCGACTCACTATCATGTCTTATGGGATGAGCACAAGTTTACTTCTGATAACTTGCAGAAGCTCATATATGATATGTGCTTTACCTTTGCAAGGTGCACTAAACCTGTATCTTTAGTCCCTCCAGTGTACTATGCTGACCTTGCTGCATATAGAGGAAGACTATACTATGAAGCAAGGATGTCAACTCAATCTCCATATTCAACTGTATCTTCTTCATCATCGCCTTTAGCTTCTTCATCCATTTCATCCACCAACTCAATTTCAAATGATCCAGGGTTTTACAAGCTGCATCCTGATACGGAAAACGGAATGTTCTTCGTCTGA 2946 0.4304 MERSGFRNTTGGHNRNGNGGGGRGNGGGGRGRGRDFHQQPQSSPGGRGRGFPQPSQNRWQQRPPSSSFPQSSSSTAPPPITKPNIDHQPPQVQTRPLPDIGALKIKEQPVENTVIGPIFRPDKGGTMSIRDCRLRVNHFPVTFNPQSIIMHYDVDVKATLPPKKGLPPKKISKSDLSMIRDKLSADHPQILPLLKTAYDGEKNIFSAVPLPEETFTVEVSKGEDERAVSYTVTITLVNKLELRKLRDYLSGRVYSIPRDILQGMDLVVKENPARRTVSLGRCFFPTNPPLMQRDLEPGIIALGGFQHSLKTTAQGLSLCLDYSVLSFRKKMSVLDFLHDHIRGFNLAEFRKYKKDVEEVLLGLKVNVTHRRTKQKYTIARLTPNDTRHITFPILDQEGQNPPRSTSLLAYFKDKYDYDIKYKDIPALDFGRNKTNFVPMELCVLVEGQRFPKEYLDKNAAKNLKNMCLASPRDRESTIQMMMKSGDGPCGGGILQNFGMNVNTSMTNVTGRVIGPPMLKLGDPRGKSAPMKLDPEKCHWNLVGKSMVEGKAVECWGILDFTSNERNNWYKLRGNQFVNNLMDKYRKLGIHMDEPVLHEYSAMWKLGDSNLLCEILEKINDKVQKKCRRRLQFLLCVMAYKDPGYKSLKWIAETKVGIVTQCCLSPSANEGKDQYLTNLSLKINAKIGGSNVELINRLPHFEDESHVMFIGADVNHPGSRDINSPSIAAVVATTNWPAANRYAARVYAQEHRVEKILNFGEICLDLVAHYEKLNKARPQKIVIFRDGVSESQFHMVLGEELKDLKTVFQHSNYFPTITLIVAQKRHQTRLFPTGAKEGTPNGNVFPGTVVDTKVVHPFEFDFYLCSHYGSLGTSKPTHYHVLWDEHKFTSDNLQKLIYDMCFTFARCTKPVSLVPPVYYADLAAYRGRLYYEARMSTQSPYSTVSSSSSPLASSSISSTNSISNDPGFYKLHPDTENGMFFV* 982
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mal7g3239 981 Gene3D - 512 694 - -
Mal7g3239 981 Pfam Argonaute linker 1 domain 279 329 IPR014811 -
Mal7g3239 981 ProSiteProfiles Piwi domain profile. 632 931 IPR003165 GO:0003676
Mal7g3239 981 SMART Piwi_a_2 632 931 IPR003165 GO:0003676
Mal7g3239 981 Pfam Piwi domain 633 930 IPR003165 GO:0003676
Mal7g3239 981 Gene3D paz domain 326 450 - -
Mal7g3239 981 MobiDBLite consensus disorder prediction 1 16 - -
Mal7g3239 981 Gene3D - 701 981 IPR036397 GO:0003676
Mal7g3239 981 Pfam PAZ domain 350 458 IPR003100 GO:0005515
Mal7g3239 981 SMART DUF1785_2 277 330 IPR014811 -
Mal7g3239 981 ProSiteProfiles PAZ domain profile. 331 446 IPR003100 GO:0005515
Mal7g3239 981 Pfam N-terminal domain of argonaute 130 267 IPR032474 -
Mal7g3239 981 CDD Piwi_ago-like 493 930 IPR045246 -
Mal7g3239 981 CDD PAZ_argonaute_like 331 445 - -
Mal7g3239 981 PANTHER TRANSLATION INITIATION FACTOR 2C, PUTATIVE-RELATED 106 980 - -
Mal7g3239 981 PANTHER EUKARYOTIC TRANSLATION INITIATION FACTOR 2C 106 980 - -
Mal7g3239 981 SUPERFAMILY Ribonuclease H-like 616 931 IPR012337 -
Mal7g3239 981 MobiDBLite consensus disorder prediction 1 96 - -
Mal7g3239 981 MobiDBLite consensus disorder prediction 36 91 - -
Mal7g3239 981 SUPERFAMILY PAZ domain 327 483 IPR036085 GO:0005515
Mal7g3239 981 SMART PAZ_2_a_3 331 478 IPR003100 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mal7g3239 Mal-Chr7 96489221 96494088 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mal7g3239 46 935 Eukaryotic Initiation Factors Gene Family AT1G48410 33.923 1.01e-148 467
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mal7g3239 K11593 - gmx:100805250 1332.78
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mal7g3239 7 96489221 96494088 Mal5g3281 5 96023249 96025598 PCT