Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mal7g3235 ATGAAAGAGGGTGTAGGTAGCAAGAAGCAGGGTGCAGCCTCACCCTGTGCTGCATGCAAGCTTCTCAGAAGAAGGTGTGCTCAAGATTGTGTCTTTGCTCCTTACTTTCCTGCTGATGAGCCTCACAAGTTTGCAAATGTCCATAAAGTCTTTGGTGCTAGCAATGTCAACAAGATGCTTCAGGACTTACCTGAGCATCAAAGAGGGGATGCAGTGAGTAGCATGGTGTATGAAGCTAATGCAAGAGTGAGAGATCCTGTGTATGGTTGTGTAGGAGCCATTTCGTCCCTTCAGCAACAGATTGATGTGCTACAAACCCAATTGGCTGTGGCCCAAGCTGAGGCAGTGCACCTAAGGGTGCGCCAAACTGCATCATCATTTTGGAATAGTGCAGGGCATAGCCCAACTAGTCCAACCTATAGTGGCTCTCCATCATCAAAAATCAATGAATCACAACAAGCCAAACATATCTTTGATATGGACATGGTGGTGGACCAAGCTGCCTATGGTGATTCAATGTGGTGA 525 0.4686 MKEGVGSKKQGAASPCAACKLLRRRCAQDCVFAPYFPADEPHKFANVHKVFGASNVNKMLQDLPEHQRGDAVSSMVYEANARVRDPVYGCVGAISSLQQQIDVLQTQLAVAQAEAVHLRVRQTASSFWNSAGHSPTSPTYSGSPSSKINESQQAKHIFDMDMVVDQAAYGDSMW* 175
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mal7g3235 174 Coils Coil 94 114 - -
Mal7g3235 174 Pfam Lateral organ boundaries (LOB) domain 15 112 IPR004883 -
Mal7g3235 174 PANTHER LOB DOMAIN-CONTAINING PROTEIN 3 7 167 - -
Mal7g3235 174 PANTHER LOB DOMAIN-CONTAINING PROTEIN 4-RELATED 7 167 - -
Mal7g3235 174 MobiDBLite consensus disorder prediction 128 151 - -
Mal7g3235 174 ProSiteProfiles LOB domain profile. 14 115 IPR004883 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mal7g3235 Mal-Chr7 96369947 96373850 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mal7g3235 1 174 AS2 family AT1G31320 71.591 4.36e-75 221
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF LOB Mal7g3235 LOB 8.2e-44 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mal7g3235 - - gmx:100802822 271.552