Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mal7g3228 ATGCAAATGGGTGGAATTAAGCCGCTTTCAGGAAAGCCATACTTTCATGTGGTCCTCTCGAAAACACATCTTAGTTCTCGCTATGGAATGGGGCTGAGCAGCAACATATGCAAAGACCTTCCTTCTAAAGCGGTTCCGACTATTCTCAAATATCGCGGTAAGAGCTGGAACATGATTTATAATGGGCAAAACAAAACCAAACAGTTTGACATCGTTGGCTGGAGAAAATTTACTGAAGATAATTATTTGAAGCTTGGAGACGCTTGCGTTTTTGAGCTCATGGATAACAGCAAAGAGAAAATCGCCTTCGAAGTTCAAATTCTTAGAGGTGACTTCCCATGCGAATTTTCTGGAATTGATGACAGTGAAGAAGAGCTAATTGTACTATCCGAATTGCCTGGAACCGGAATGTTTGGACTATACTTGAATTTTGGGGAACAGAACGATGCCATAGTCCATTACTTGGTTTGA 471 0.4119 MQMGGIKPLSGKPYFHVVLSKTHLSSRYGMGLSSNICKDLPSKAVPTILKYRGKSWNMIYNGQNKTKQFDIVGWRKFTEDNYLKLGDACVFELMDNSKEKIAFEVQILRGDFPCEFSGIDDSEEELIVLSELPGTGMFGLYLNFGEQNDAIVHYLV* 157
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mal7g3228 156 PANTHER B3 DOMAIN-CONTAINING PROTEIN OS04G0386900 6 122 - -
Mal7g3228 156 PANTHER B3 DOMAIN-CONTAINING PROTEIN OS11G0197600-RELATED 6 122 IPR044837 -
Mal7g3228 156 Pfam B3 DNA binding domain 15 103 IPR003340 GO:0003677
Mal7g3228 156 Gene3D - 6 111 IPR015300 -
Mal7g3228 156 CDD B3_DNA 13 109 IPR003340 GO:0003677
Mal7g3228 156 SMART B3_2 15 111 IPR003340 GO:0003677
Mal7g3228 156 SUPERFAMILY DNA-binding pseudobarrel domain 11 102 IPR015300 -
Mal7g3228 156 ProSiteProfiles B3 DNA-binding domain profile. 47 111 IPR003340 GO:0003677
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mal7g3228 15 111 REM Transcription Factor Family AT4G33280 27.273 4.37e-07 46.6
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF B3 Mal7g3228 B3 2.5e-11 CL0405
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mal7g3228 - - cam:101511251 201.83