Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mal7g3202 ATGGAAGAGAGACAGAAGAAGTTTGTGTGCAAGTATTGCTTGAAGAGGTTTCCTTGTGGAAAGTCTCTTGGCGGTCACATCAGAACCCATATGACAGAAGAAAGAACTAATGCTGCTGCTATTGCTGCTGCTGCTGCTGATGATGATGATGCTCACATTTTCAACAAGAGAGATGCTGAACATGTTGCTGGTGGTGATGGTGGAAATCCCATTTATGGTCTTAGAGAGAATCCCAAGAAAACAATGAGGTTTGTGCATTCACATCATCATGCTGCTGGTGCTGGTGCTGCTGCAACCACATTGGAATATGAGATGATCAAATTCTGTAAAGAATGTGGGAAAGGTTTTCCTTCATTGAAAGCACTTTGTGGTCACATGGCTTCTCATTCTGAGAAAGACAAGAGAAGAATTATCGAGGAAGATGCTCAATCTGATGATACTGATGATGATTGTGTTGCTGCTACAACAATGAATCTAAGGAAATCTAAGAGAAGAATAAGGTTCAAGTCTCTTACTCTTACAAATCAACAACCTTCATCTTCTTCTGTTAATGGTTCTTCATCTGTTTCTGAGATGGAACAGGAACAACAAGAAGAGGTTGCTAGGTGTTTGATGTTATTGTCTAGAGATTTTTTTAGTCATAAGGGTCGTTTTGTTTCTGAATCTTGTGATGATAACAATGAGGTTGTTCTTGAGACGAAATCCAAGATTGTTATCAGAAATGGTAGCAAATTTGTAGCTAATAATAATGGTCGTGAGTTTGTTGAGGAGAAGAAGAAGCTGAAGTCTGTTGGTGGGATTGGTGTTTCGAGTAATTCGGATTCGAGGGATTTTAAGATCAAATTTGGTGTTTCGAATAATTCAAAGAAGATCAAATTTGTAGATTCAAGTGTTTCAAACTATGAATTCAAGAGGCCTAAACCATGTGGGTAA 933 0.3859 MEERQKKFVCKYCLKRFPCGKSLGGHIRTHMTEERTNAAAIAAAAADDDDAHIFNKRDAEHVAGGDGGNPIYGLRENPKKTMRFVHSHHHAAGAGAAATTLEYEMIKFCKECGKGFPSLKALCGHMASHSEKDKRRIIEEDAQSDDTDDDCVAATTMNLRKSKRRIRFKSLTLTNQQPSSSSVNGSSSVSEMEQEQQEEVARCLMLLSRDFFSHKGRFVSESCDDNNEVVLETKSKIVIRNGSKFVANNNGREFVEEKKKLKSVGGIGVSSNSDSRDFKIKFGVSNNSKKIKFVDSSVSNYEFKRPKPCG* 311
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mal7g3202 310 ProSitePatterns Zinc finger C2H2 type domain signature. 109 129 IPR013087 -
Mal7g3202 310 Gene3D Classic Zinc Finger 1 61 - -
Mal7g3202 310 MobiDBLite consensus disorder prediction 173 192 - -
Mal7g3202 310 PANTHER C2H2-LIKE ZINC FINGER PROTEIN 1 307 - -
Mal7g3202 310 ProSiteProfiles Zinc finger C2H2 type domain profile. 8 35 IPR013087 -
Mal7g3202 310 PANTHER C2H2-LIKE ZINC FINGER PROTEIN 1 307 - -
Mal7g3202 310 SUPERFAMILY beta-beta-alpha zinc fingers 5 35 IPR036236 -
Mal7g3202 310 ProSitePatterns Zinc finger C2H2 type domain signature. 10 30 IPR013087 -
Mal7g3202 310 SMART c2h2final6 107 129 IPR013087 -
Mal7g3202 310 SMART c2h2final6 8 30 IPR013087 -
Mal7g3202 310 ProSiteProfiles Zinc finger C2H2 type domain profile. 107 134 IPR013087 -
Mal7g3202 310 Pfam C2H2-type zinc finger 109 131 - -
Mal7g3202 310 Pfam C2H2-type zinc finger 8 32 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mal7g3202 Mal-Chr7 95982978 95984650 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mal7g3202 1 235 C2H2 Transcription Factor Family AT1G26610 43.154 6.61e-47 162
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF C2H2 Mal7g3202 zf-C2H2_6 5.7e-07 CL0361