Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mal7g3173 ATGGTGAACAAGAGAAGAAAAGTTAGAGAATGTGAAGGAGAGGAAAAGAATACTGAAGAAGGAAACACTGAATGGAAACAGATAAGAGAAGAGGCAGCATCAGTAGCAGCTGCTCTACTGAGAGTTCGAAGAGGAAGAAAACGTTACATTGGGGTGAGGCAAAGACCTTCAGGGAGATGGGTGGCTGAGATCAAAGACACTATACAGGACATAAGACTATGGTTGGGGACTTATGACACTGGTGAAGAGGCTGCTAGAGCTTATGATGAGGCTGCACGCTTGCTTCGCGGTGCAAACACTCGCACAAATTTCTTCCTTTGTCCATCTTCTCATTATGTTCCCGCTCTTCCTCCAAAGATTGCCAAACTCCTGTTTATTAGACTCAAAGCCAGAAACACTGCCTCTTCTTTTATTCCTACTAGTACTGCTCCTTTTCCTATTAACCACTACGATGAGCAAGAAACCAAAGCAGAACCTGAACCCCACTTTTTTCACCAAATAGAAGAAAACTTTCTAGAAAGCTATGATGGTGCTAGTTATGGTTCTTCTGACATTACTTTTGACTGTGGTAGTGGGACTAGTGAAGAAAATTTTAACCAAGAGGGTAGCAGAGAGGATCTCAGATTGGGGTATCATTGTGCTAACAGTGTTGATGATGGTGGAAACAACCAGATTGTGGGGTGTAATGGTGAATTTGAAGACTGCGAAGTTGGACTCATTGACTTCCAGTTTCTGGATACTGTGGGATCATTAAGCCGCTCTTACTCTTCTCCGTTTGAGATAGCAGAGGAAATGGTGGGGCCAATAGCGGAAGAGAAATTTGATGTGGATGATTCAATGATACTTAGAGAAACTTTTAGAATGAAGTATGAACGTAAATTCTCAGCTTGTCTTTACACCTTCGTTGGGGTGTCTGAGTGTTTGAGGCTACAAGTTGGACTAGAAAATGGAAATGAATTCTAA 963 0.4216 MVNKRRKVRECEGEEKNTEEGNTEWKQIREEAASVAAALLRVRRGRKRYIGVRQRPSGRWVAEIKDTIQDIRLWLGTYDTGEEAARAYDEAARLLRGANTRTNFFLCPSSHYVPALPPKIAKLLFIRLKARNTASSFIPTSTAPFPINHYDEQETKAEPEPHFFHQIEENFLESYDGASYGSSDITFDCGSGTSEENFNQEGSREDLRLGYHCANSVDDGGNNQIVGCNGEFEDCEVGLIDFQFLDTVGSLSRSYSSPFEIAEEMVGPIAEEKFDVDDSMILRETFRMKYERKFSACLYTFVGVSECLRLQVGLENGNEF* 321
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mal7g3173 320 PRINTS Ethylene responsive element binding protein signature 49 60 IPR001471 GO:0003700|GO:0006355
Mal7g3173 320 PRINTS Ethylene responsive element binding protein signature 71 87 IPR001471 GO:0003700|GO:0006355
Mal7g3173 320 Pfam AP2 domain 48 97 IPR001471 GO:0003700|GO:0006355
Mal7g3173 320 Gene3D AP2/ERF domain 47 106 IPR036955 GO:0003700|GO:0006355
Mal7g3173 320 SMART rav1_2 48 111 IPR001471 GO:0003700|GO:0006355
Mal7g3173 320 CDD AP2 47 104 IPR001471 GO:0003700|GO:0006355
Mal7g3173 320 PANTHER AP2/ERF DOMAIN TRANSCRIPTION FACTOR 5 320 - -
Mal7g3173 320 PANTHER SHN SHINE , DNA BINDING / TRANSCRIPTION FACTOR 5 320 - -
Mal7g3173 320 MobiDBLite consensus disorder prediction 1 22 - -
Mal7g3173 320 SUPERFAMILY DNA-binding domain 48 105 IPR016177 GO:0003677
Mal7g3173 320 ProSiteProfiles AP2/ERF domain profile. 48 105 IPR001471 GO:0003700|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mal7g3173 Mal-Chr7 95684413 95685375 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mal7g3173 41 104 AP2-EREBP Transcription Factor Family AT5G19790 70.312 5.87e-27 104
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF AP2/ERF-ERF Mal7g3173 AP2 1.8e-14 CL0081
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mal7g3173 K09286 - gmx:100793940 339.347