Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mal7g3153 ATGAAGAGGAAGCATAGAGGCTTGCACGTGAGCCGGAAGAAAATGGCTTTCATTGGCTTGCTTTTGGTGTGTTCTCTTACTCTGTTCTCCTCTGTTTATGCCTATGGTGAAGGATGGACTAATGCTCATGCTACCTTCTATGGAGGAAGTGATGCATCAGGAACAATGGGTGGGGCTTGTGGATATGGTAACCTTTATAGTCAAGGTTATGGAACAAACACTGCTGCTTTGAGCACAGCACTTTTCAACAATGGCTTAAGCTGTGGCTCTTGCTATGAAATTAGGTGTTCAAATGACCATAGATGGTGCCTTCCTGGTTCCATTGTGGTCACTGCTACCAATTTCTGTCCACCGAACAATGCCTTACCAAACAATGAAGGTGGTTGGTGTAATCCTCCACTTCAACATTTTGATCTTGCTCAACCTGTTTTTCTTCGTATTGCTCAGTATAAAGCTGGAATTGTTCCTGTAGATTTTAGAAGGGTGTCATGTAGAAGAAAGGGGGGTATAAGGTTCACTATCAATGGACATTCTTACTTCAACCTTGTTCTCATCACAAACGTTGGTGGTGCTGGAGATGTACATGCTGCATCCATCAAAGGGTCAAAAACTGGTTGGATATCTATGTCAAGGAATTGGGGACAGAACTGGCAGAGTAACAATTATCTTAATGGTCAAAGCTTGTCTTTTAAGGTTACAACAAGTGATGGTCGTACTGTGGTTTCCAATAATGTTGCTCCAGCTGGATGGTCTTTTGGTCAAACCTATACTGGTGCTCAAATCCACTAA 789 0.4259 MKRKHRGLHVSRKKMAFIGLLLVCSLTLFSSVYAYGEGWTNAHATFYGGSDASGTMGGACGYGNLYSQGYGTNTAALSTALFNNGLSCGSCYEIRCSNDHRWCLPGSIVVTATNFCPPNNALPNNEGGWCNPPLQHFDLAQPVFLRIAQYKAGIVPVDFRRVSCRRKGGIRFTINGHSYFNLVLITNVGGAGDVHAASIKGSKTGWISMSRNWGQNWQSNNYLNGQSLSFKVTTSDGRTVVSNNVAPAGWSFGQTYTGAQIH* 263
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mal7g3153 262 ProSiteProfiles Expansin, Cellulose-binding-like domain profile. 179 258 IPR007117 -
Mal7g3153 262 PRINTS Expansin/Lol pI family signature 206 220 IPR007118 GO:0005576
Mal7g3153 262 PRINTS Expansin/Lol pI family signature 244 258 IPR007118 GO:0005576
Mal7g3153 262 PRINTS Expansin/Lol pI family signature 56 74 IPR007118 GO:0005576
Mal7g3153 262 PRINTS Expansin/Lol pI family signature 38 53 IPR007118 GO:0005576
Mal7g3153 262 PRINTS Expansin/Lol pI family signature 152 168 IPR007118 GO:0005576
Mal7g3153 262 PRINTS Expansin/Lol pI family signature 78 96 IPR007118 GO:0005576
Mal7g3153 262 ProSiteProfiles Expansin, family-45 endoglucanase-like domain profile. 57 169 IPR007112 -
Mal7g3153 262 PRINTS Expansin signature 96 107 IPR002963 GO:0009664
Mal7g3153 262 PRINTS Expansin signature 69 83 IPR002963 GO:0009664
Mal7g3153 262 PRINTS Expansin signature 108 118 IPR002963 GO:0009664
Mal7g3153 262 PRINTS Expansin signature 215 236 IPR002963 GO:0009664
Mal7g3153 262 PRINTS Expansin signature 127 144 IPR002963 GO:0009664
Mal7g3153 262 PRINTS Expansin signature 168 180 IPR002963 GO:0009664
Mal7g3153 262 PRINTS Expansin signature 180 201 IPR002963 GO:0009664
Mal7g3153 262 PRINTS Expansin signature 244 260 IPR002963 GO:0009664
Mal7g3153 262 PRINTS Expansin signature 144 157 IPR002963 GO:0009664
Mal7g3153 262 Gene3D - 169 261 IPR036749 -
Mal7g3153 262 PANTHER EXPANSIN-A1 20 261 - -
Mal7g3153 262 Pfam Lytic transglycolase 74 158 IPR009009 -
Mal7g3153 262 Pfam Expansin C-terminal domain 170 247 IPR007117 -
Mal7g3153 262 SUPERFAMILY PHL pollen allergen 166 258 IPR036749 -
Mal7g3153 262 SMART dpbb_1 74 159 IPR007112 -
Mal7g3153 262 PANTHER EXPANSIN-A15 20 261 IPR002963 GO:0009664
Mal7g3153 262 SUPERFAMILY Barwin-like endoglucanases 23 187 IPR036908 -
Mal7g3153 262 Gene3D - 26 165 IPR036908 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mal7g3153 Mal-Chr7 95430680 95432777 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mal7g3153 14 262 Expansin Gene Family AT2G03090 78.313 6.61e-151 419
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mal7g3153 - K20628 gmx:100776066 488.034