Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mal7g3136 ATGGCGGCTTTGACGATGAGAGCTGCAGCGGCGGCGGCGGCTCCCCGCGGTTTGTGCCGACTCTTCTGCACGAATTCAACCGCTTCTTCTTCCACTTTCCCTTTCTCTTCATCGCCGCCTTCTGGAGCTCCTCCGCCTTCCGCTCGACAGATGGCCGAGCCTAATACCAACCTCTTCGTCTCTGGGCTTAGCAAACGTACTACAACTGAGACACTGAGGGAAGCATTTCAAAAGTTCGGTGAAGTTGTTCACGCAAGGGTGGTAACCGATCGAGTCTCAGGTTACTCTAAGGGATTTGGTTTCGTGAAATATGCTACTTTAGAAGATGCTGCTAGGGGCATTGAAGGCATGGATGGCAAGTTTTTAGAAGGCTGGGTTATATTTGCAGAGTATGCAAGACCAAGGCCACCACCCGGAGAAGCTGTAAATAATACGGGCCGACCTTATTAA 450 0.5133 MAALTMRAAAAAAAPRGLCRLFCTNSTASSSTFPFSSSPPSGAPPPSARQMAEPNTNLFVSGLSKRTTTETLREAFQKFGEVVHARVVTDRVSGYSKGFGFVKYATLEDAARGIEGMDGKFLEGWVIFAEYARPRPPPGEAVNNTGRPY* 150
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mal7g3136 149 MobiDBLite consensus disorder prediction 29 52 - -
Mal7g3136 149 SUPERFAMILY RNA-binding domain, RBD 43 144 IPR035979 GO:0003676
Mal7g3136 149 SMART rrm1_1 57 130 IPR000504 GO:0003723
Mal7g3136 149 PANTHER GLYCINE-RICH RNA-BINDING PROTEIN 3, MITOCHONDRIAL-LIKE 5 146 - -
Mal7g3136 149 ProSiteProfiles Eukaryotic RNA Recognition Motif (RRM) profile. 56 134 IPR000504 GO:0003723
Mal7g3136 149 PANTHER TRANSFORMER-2-RELATED 5 146 - -
Mal7g3136 149 Pfam RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) 58 124 IPR000504 GO:0003723
Mal7g3136 149 Gene3D - 24 142 IPR012677 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mal7g3136 Mal-Chr7 95147870 95150159 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mal7g3136 27 136 Eukaryotic Initiation Factors Gene Family AT3G11400 33.600 1.55e-12 61.6
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mal7g3136 - - gmx:100784609 196.052