Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mal7g3135 ATGAGGGCAGCAGCGACGGCGGCGCCCGGTGGTTTCCGCCGGCTTTTCAGCACGAAGCCAACCGCGTCTTCTCCCACTGTCCCCTTCGCTTCAACGCTGCCTTCTGGAACGCCGCCTTCTGGAGCTACTTCCGCTCTAAAGACGGCGGAGCCCAACCAAGTTCTCTTCGTCACTGGGCTTAATAAACGTACTTCATCAGAGACGCTGAGGCAAGCATTTCAAAAGTTTGGTGAAGTTAAACAGGCAAGGGTGGTAGCAGATCGACTCTCAGGTTACTCTAAGGGATTTGGTTTCGTGAAATATGCTAATTTAGAAGATGCTGCTAAGGCCATTGAAGGCATGGATGGCAAGTTTTTAGAAGGCTGGGTTGTATTTGCAGAGTATGCAAGACCAAAAACCAATGCTATAGCCTCCCAGACACATAATGAACCATCCCACTCCAAACCTGAAGAAAAGAAAAATGAACCAAAGGAGATGAGTGAAAAGAAGAAGGAAACTGCTGGAAAGAAGAAGAAGGTTAACAAGAAAAAGAAGACTCCAAAGGTAGTTGCAGACCAACCAATGAACAAAGATGAGGGAGAGAAGAAAGCTGAGGAAAAGAAAGAGGAATAG 612 0.4722 MRAAATAAPGGFRRLFSTKPTASSPTVPFASTLPSGTPPSGATSALKTAEPNQVLFVTGLNKRTSSETLRQAFQKFGEVKQARVVADRLSGYSKGFGFVKYANLEDAAKAIEGMDGKFLEGWVVFAEYARPKTNAIASQTHNEPSHSKPEEKKNEPKEMSEKKKETAGKKKKVNKKKKTPKVVADQPMNKDEGEKKAEEKKEE* 204
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mal7g3135 203 MobiDBLite consensus disorder prediction 135 203 - -
Mal7g3135 203 ProSiteProfiles Eukaryotic RNA Recognition Motif (RRM) profile. 53 131 IPR000504 GO:0003723
Mal7g3135 203 MobiDBLite consensus disorder prediction 17 46 - -
Mal7g3135 203 MobiDBLite consensus disorder prediction 1 46 - -
Mal7g3135 203 PANTHER GLYCINE-RICH RNA-BINDING PROTEIN 3, MITOCHONDRIAL-LIKE 2 147 - -
Mal7g3135 203 SMART rrm1_1 54 127 IPR000504 GO:0003723
Mal7g3135 203 MobiDBLite consensus disorder prediction 179 203 - -
Mal7g3135 203 Pfam RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) 55 121 IPR000504 GO:0003723
Mal7g3135 203 PANTHER TRANSFORMER-2-RELATED 2 147 - -
Mal7g3135 203 SUPERFAMILY RNA-binding domain, RBD 25 137 IPR035979 GO:0003676
Mal7g3135 203 MobiDBLite consensus disorder prediction 144 167 - -
Mal7g3135 203 Gene3D - 34 140 IPR012677 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mal7g3135 Mal-Chr7 95143928 95146247 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mal7g3135 32 132 Eukaryotic Initiation Factors Gene Family AT3G11400 29.703 5.07e-11 58.9
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mal7g3135 - - mtr:MTR_4g081510 225.328