Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mal7g3124 ATGGTTTCCCGGGAAAACAACAATTGGATTATCGATTACGGTTTGTATGATGATATGCCCGTTCCCGATTCAACTTTCGCCCTCCCCTCCCCCGCCTTCACATGGCCGCAGCAGCCCTTCAACATTTCATCCAATGTCAGTGCTGAAATTGATGGCTCATTAGGGGATTCTGACAGTCTCAAAGAGTCTGGTTCAAAGAAGAGGGTTAGATCTGAGTCATGTGCTGCTACTAGCTCCAAAGCATGTCGGGAGAAGTTGCGTAGAGATAGGCTTAACGACAAGTTTATTGAACTGGGATCCATCTTGGAGCCTGGAAGGCCTGCCAAAACAGACAAGGCTGCCATCCTGATTGATGCTGTCCGAATGGTGACACAGTTAAGGGGTGAAGCCCAAAAGCTGAAAGATGCTAACACGGGTCTTCAAGAAAAGATTAAAGAGTTAAAGGTTGAGAAGAATGAGCTTCGTGACGAGAAACAGAGACTCAAGGCAGAGAAAGAGAAGTTGGAGCAGCAGCTGAAATCTATGAATGCACAACCTAGTTTCTTGCCTACACCTACTGCACTCCCTGCTGCATTTGCTGCACAAGGCCAAGCCCATGGCAATAAATTGGTACCCTTTATTAGTTATCCAGGAGTTGCAATGTGGCAATTTATGCCACCTGCTGCAGTTGATACCTCACAGGATCATGTACTTCGTCCTCCAGTTGCCTAA 711 0.4684 MVSRENNNWIIDYGLYDDMPVPDSTFALPSPAFTWPQQPFNISSNVSAEIDGSLGDSDSLKESGSKKRVRSESCAATSSKACREKLRRDRLNDKFIELGSILEPGRPAKTDKAAILIDAVRMVTQLRGEAQKLKDANTGLQEKIKELKVEKNELRDEKQRLKAEKEKLEQQLKSMNAQPSFLPTPTALPAAFAAQGQAHGNKLVPFISYPGVAMWQFMPPAAVDTSQDHVLRPPVA* 237
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mal7g3124 236 PANTHER BHLH TRANSCRIPTION FACTOR 1 236 IPR044818 GO:0003700|GO:0006355|GO:0046983|GO:0055072
Mal7g3124 236 CDD bHLH_AtILR3_like 80 155 - -
Mal7g3124 236 SMART finulus 81 132 IPR011598 GO:0046983
Mal7g3124 236 Coils Coil 123 178 - -
Mal7g3124 236 MobiDBLite consensus disorder prediction 53 74 - -
Mal7g3124 236 SUPERFAMILY HLH, helix-loop-helix DNA-binding domain 75 145 IPR036638 GO:0046983
Mal7g3124 236 Pfam Helix-loop-helix DNA-binding domain 79 126 IPR011598 GO:0046983
Mal7g3124 236 PANTHER BHLH DOMAIN CLASS TRANSCRIPTION FACTOR 1 236 - -
Mal7g3124 236 ProSiteProfiles Myc-type, basic helix-loop-helix (bHLH) domain profile. 75 126 IPR011598 GO:0046983
Mal7g3124 236 Gene3D - 76 152 IPR036638 GO:0046983
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mal7g3124 Mal-Chr7 95021397 95024058 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mal7g3124 1 236 Basic Helix-Loop-Helix Transcription Factor Gene Family AT5G54680 73.640 1.99e-121 343
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bHLH Mal7g3124 HLH 9.7e-10 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mal7g3124 - - gmx:100788858 386.341