Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mal7g3113 ATGGAATCTCAAATCAAGCATGCTATTGTTGTCAAGGTTATGGGTCGTACTGGTTCCAGAGGACAGGTGACTCAAGTTAGAGTGAAGTTTACGGATGACCAGAACCGTTTCATCATGAGGAACGTGAAAGGACCAGTTAGAGAAGGAGACATGCTCACCCTACTTGAGTCTGAGAGAGAAGCAAGAAGGTTGCGCTAG 198 0.4596 MESQIKHAIVVKVMGRTGSRGQVTQVRVKFTDDQNRFIMRNVKGPVREGDMLTLLESEREARRLR* 66
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mal7g3113 65 PANTHER 40S RIBOSOMAL PROTEIN S28-1 1 65 - -
Mal7g3113 65 Pfam Ribosomal protein S28e 4 64 IPR000289 GO:0003735|GO:0005840|GO:0006412
Mal7g3113 65 SUPERFAMILY Nucleic acid-binding proteins 2 65 IPR012340 -
Mal7g3113 65 ProSitePatterns Ribosomal protein S28e signature. 56 64 IPR028626 -
Mal7g3113 65 PANTHER 40S RIBOSOMAL PROTEIN S28 1 65 IPR000289 GO:0003735|GO:0005840|GO:0006412
Mal7g3113 65 Hamap 30S ribosomal protein S28e [rps28e]. 1 65 IPR000289 GO:0003735|GO:0005840|GO:0006412
Mal7g3113 65 CDD S1_S28E 6 65 IPR000289 GO:0003735|GO:0005840|GO:0006412
Mal7g3113 65 Gene3D - 1 65 IPR012340 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mal7g3113 Mal-Chr7 94870927 94871124 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mal7g3113 1 65 Cytoplasmic Ribosomal Protein Gene Family AT5G64140 90.769 4.49e-37 116
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mal7g3113 K02979 - csin:114292156 100.138