Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mal7g3100 ATGGCTAGTAGTAGCATGATCCAAAGTGTCTCTTCACCTAGGATGAAATGGAAATATGATGTGTTTGTGAGCTTCCGTGGCGAAGACACTCGCAACAATTTCACTGATCATCTTTTTAGCGCTCTTCGTAAAAAAAACATTGTTGCCTTTAGGGATGATACAAACCTCAAGAAAGGGAAAGATATATCATCTGAGCTTGTACAAGCCATTGAAGGATCCCAGATTTGGATTGTTCTCTTCTCAAGAAACTATGCTTCTTCCACATGGTGCTTGCGGGAATTGGCAAAAATTGTTGATTGCATGAAAGTACAAGGACACACTGTTCTACCTATTTTCTATGATGTGAGTCCATCTGAGGTACGAAAGCAAAGCGGAGATTTTGAAAAAGCCTTTCGAGAGCATGAAGAAAGATTCAAAGAAAACTTAGAAGAAGTGCAAAGATGGAGGGAAGTCCTAGCACAAGTAGCCAATCTCTCTGGTAGAGAAATAGGGAATAAGCCACAAAATGCAGAGATTGAAAATATTATTAAAAATGTAACATGCTTATTGCGTCACAAATCTTCAACTTTAGCCCGCGATATAGTTGGGATGCACTCACGAATGGAAGAAGTAGAACAGCATCTGAGTTTGGACTCAGATGATGATGTTCGAGTTGTAGGTATTTGGGGAATGGGCGGAATAGGGAAGACAACTCTTGCTAAAGCTGTGTATGCTAGAATCTCTAATCAATTTGCTGGTTGCTGCTTTATTGATGATGTAAGTAAAACTTATGGAGGTTATGGCCCAATTGGAGTGCAAAAGCAACTTCTTTGTCAAAGTCTAAATGAAGAAAATCTCACGATATGGAATCATTCTATGGCATCTAATTTTATTCAAACTAGGCTATGTCAAATAAAATCCCTTGTAGTTCTTGATAATGTTGATCAAGTTGAACAACTGGATCAATTGGCCATGACACGAGACTCTCTAGGCACCGGGAGTAGAATCATCATAATTTCTAGAAATCGCCATATCTTGAGAGAGCATGAAGTAGATCAAATTTACGAAGTTCAACCCTTGGATCGTAATAATGCCCTTCAATTGTTTTGTAGAAAAGCTTTCAAAAGTGATTATATCATGAGCGGTTACAAAGACTTGACATATGATGCACTAAAATATGCCAAGGGCCTTCCATTAGCAATTAAAGTGTTGGGCTCATTTTTGTATGGTCTAAATGTGTCTGAATGGAGAAGTGCATTGGAAAGATTAAGAGACAATCCTAGTACAGATATTATGAAGGTACTCCGAATGAGTTATGATGGACTAGAAGATACAGAAAAAGAAATATTTTTAGATATTGCTTGTTTCTTTGATGGAGAGGATGAGACATACCTGAGAAAAGTTTTAGATTTTCGAGGATTCCACCCCGAAATTGGCTTAAGAGTACTCTTTGATAAATCATTAATAACCTTTGAGATGGGGAGCATTTATATGCATGATTTGTTAAAAGAACTTGGCAGGAGCATCGTTAAAGAAAAATCACCCAAAGAACCAAGAAAGTGGAGCAGATTGTGGGACTACAAGAATGTTCACAATGTTATCTCAGAAAACATGGCAACAGAAAATCTCGAAGCCATAGTTCTGCCATCGCCTTATTCAGAAAATTTTGAAGAAATACAAGCAATGCCAACACTGAAAGCTGAAGCTTTAGCACAAATGAGTCGCCTTAAATTGCTCAGGCTGTGGAATTTGAGTTTCTCTGGAAGTCTCAATTTTCTTTCAAGTGAATTGGGGTATCTGCATTGGGAAAAATATCCTTTCACTTGTTTGCCATCAAGTTTTGAGCCAGATAAAGTTGTTGAATTGATCCTACCTCATAGCAACATCAAACAACTATGGAAGTGCACAAAGCCTCTTCATAATTTGACACATATTGATCTTTCTCAATCGAGAAATCTTACTGTCTTGCCAAGTTTCTTGGAGATTCCGAATCTGGAGTTCCTAAATCTTGAAGGATGTAAAAAACTTGTGCAGATTGGTCCAACCATTGGTACCTTGAGAAAGCTTTCCAGATTAAATTTGAATAATTGTACAAATCTGGTCAGTATTCCTTAA 2094 0.3763 MASSSMIQSVSSPRMKWKYDVFVSFRGEDTRNNFTDHLFSALRKKNIVAFRDDTNLKKGKDISSELVQAIEGSQIWIVLFSRNYASSTWCLRELAKIVDCMKVQGHTVLPIFYDVSPSEVRKQSGDFEKAFREHEERFKENLEEVQRWREVLAQVANLSGREIGNKPQNAEIENIIKNVTCLLRHKSSTLARDIVGMHSRMEEVEQHLSLDSDDDVRVVGIWGMGGIGKTTLAKAVYARISNQFAGCCFIDDVSKTYGGYGPIGVQKQLLCQSLNEENLTIWNHSMASNFIQTRLCQIKSLVVLDNVDQVEQLDQLAMTRDSLGTGSRIIIISRNRHILREHEVDQIYEVQPLDRNNALQLFCRKAFKSDYIMSGYKDLTYDALKYAKGLPLAIKVLGSFLYGLNVSEWRSALERLRDNPSTDIMKVLRMSYDGLEDTEKEIFLDIACFFDGEDETYLRKVLDFRGFHPEIGLRVLFDKSLITFEMGSIYMHDLLKELGRSIVKEKSPKEPRKWSRLWDYKNVHNVISENMATENLEAIVLPSPYSENFEEIQAMPTLKAEALAQMSRLKLLRLWNLSFSGSLNFLSSELGYLHWEKYPFTCLPSSFEPDKVVELILPHSNIKQLWKCTKPLHNLTHIDLSQSRNLTVLPSFLEIPNLEFLNLEGCKKLVQIGPTIGTLRKLSRLNLNNCTNLVSIP* 698
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mal7g3100 697 SUPERFAMILY L domain-like 508 697 - -
Mal7g3100 697 Pfam Leucine Rich Repeat 613 630 IPR011713 -
Mal7g3100 697 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN 12 696 IPR044974 GO:0006952
Mal7g3100 697 PANTHER RESISTANCE PROTEIN (TIR-NBS-LRR CLASS), PUTATIVE-RELATED 12 696 - -
Mal7g3100 697 Gene3D - 15 180 IPR035897 -
Mal7g3100 697 SUPERFAMILY Toll/Interleukin receptor TIR domain 12 160 IPR035897 -
Mal7g3100 697 Gene3D - 353 436 IPR042197 -
Mal7g3100 697 Gene3D Ribonuclease Inhibitor 534 697 IPR032675 -
Mal7g3100 697 ProSiteProfiles TIR domain profile. 17 183 IPR000157 GO:0007165
Mal7g3100 697 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 180 446 IPR027417 -
Mal7g3100 697 Pfam NB-ARC domain 200 432 IPR002182 GO:0043531
Mal7g3100 697 PRINTS Disease resistance protein signature 218 233 - -
Mal7g3100 697 PRINTS Disease resistance protein signature 294 308 - -
Mal7g3100 697 PRINTS Disease resistance protein signature 677 693 - -
Mal7g3100 697 PRINTS Disease resistance protein signature 387 401 - -
Mal7g3100 697 SMART till_3 18 158 IPR000157 GO:0007165
Mal7g3100 697 Pfam TIR domain 18 164 IPR000157 GO:0007165
Mal7g3100 697 Gene3D - 181 348 IPR027417 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mal7g3100 Mal-Chr7 94653888 94656453 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mal7g3100 19 697 WRKY Transcription Factor Family AT4G12020 30.813 2.66e-89 304
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mal7g3100 - - mtr:MTR_4g080777 1049.27