Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mal7g3087 ATGAGCCGAAACATGAACAATTTCACACCTTTGCCAGGGCTTTGGAGAACAGGTTCTAGAGCTTATGATGCTTCTCCTCACACTTCCAATAATACTCATGAATTCAATGAAGTACCTGTGTTTTACAGATCTCATCATTCTAATAGGACCTATGATGAGAGGAGTTCAGGTGCACAAGATCCACTGCAATTGTGGGAAGTCAGAAGAACTCCTACTGAACATCACAGGATACCAAATTTTCCAATACAACCATATAGAAGACAACAAACTTATAATCACAATGAGGACATGAGAAGAAGGGGTTTCAACCCCACAAGACTCAGAGAGATTTTCCGGCATTCACCTTCAAGATCAACATCAACACAGCAAACAAACACACAAGTTCCACAATTGGTAGAAAATTCCAAATCAACTATTTTAAGCAAGTTAAGGAAAGTAGTCTACGACCCTACACCAAAGCGTTTAGCTAGAAAAGTGAGCTTATATTATAGAGGCAGTGCTGCAAATGATTTGAAAGATAGGATCAAAGAAAATAAGGAAGATGGTATGAGATGTGCTATTTGCTTGGAGGATTTTGAGGCCAAAGAAGAGGTGATGCTTACTCCATGCAACCACATGTTTCATGAGGATTGCATAGTAACTTGGTTAACAAGTAAAGGTCAGTGTCCAGTTTGTAGGTTTGTGATTTTTGAAGGAGTGAAGGAAAAATCATCTCCCTTTAACAGGAATGACATTGCCAATTTGGAACCCGAGGACGTGATCTCTGCAGAGCTTTTGTCAGTTTTGAGGGCCATGGAAGAAGCTTTTCATTTAGAAAGTGTGAATTACGGATAA 834 0.3945 MSRNMNNFTPLPGLWRTGSRAYDASPHTSNNTHEFNEVPVFYRSHHSNRTYDERSSGAQDPLQLWEVRRTPTEHHRIPNFPIQPYRRQQTYNHNEDMRRRGFNPTRLREIFRHSPSRSTSTQQTNTQVPQLVENSKSTILSKLRKVVYDPTPKRLARKVSLYYRGSAANDLKDRIKENKEDGMRCAICLEDFEAKEEVMLTPCNHMFHEDCIVTWLTSKGQCPVCRFVIFEGVKEKSSPFNRNDIANLEPEDVISAELLSVLRAMEEAFHLESVNYG* 278
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mal7g3087 277 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 170 241 IPR013083 -
Mal7g3087 277 PANTHER RING FINGER AND PROTEASE ASSOCIATED DOMAIN-CONTAINING 2 276 - -
Mal7g3087 277 PANTHER ANAPHASE-PROMOTING COMPLEX SUBUNIT 11 RING-H2 FINGER PROTEIN 2 276 - -
Mal7g3087 277 Pfam Ring finger domain 184 226 IPR001841 -
Mal7g3087 277 ProSiteProfiles Zinc finger RING-type profile. 185 226 IPR001841 -
Mal7g3087 277 SUPERFAMILY RING/U-box 177 232 - -
Mal7g3087 277 SMART ring_2 185 225 IPR001841 -
Mal7g3087 277 CDD RING-H2_PA-TM-RING 185 226 - -
Mal7g3087 277 SMART ringv_2 184 226 IPR011016 GO:0008270
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mal7g3087 Mal-Chr7 94549543 94551196 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mal7g3087 134 269 C3H Transcription Factor Family AT3G58720 52.113 2.93e-42 144
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mal7g3087 - K19041 gmx:100810607 306.605
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mal7g3087 7 94549543 94551196 Mal7g3087 7 94549543 94551196 ECH