Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mal7g3067 ATGGCTAGCAGCAGCAACTCCTCTTCTTCAGCTCTGGTAACATTGCCAAAGAGGAAGAATTATTATGATGTGTTTGTCACCTTCAGAGGTGAAGATACACGCTTCAATTTCACCGATCATCTTTTTGCAGCCCTTAAAAGAAAAGGCATTTTTGCATTCAGAGATGACACTAAGCTTCAAAAAGGTGAATCCATAGCACCTGAACTCTTTCATGCAATTCAAGTCTCTCAGGTTTTCATTGTGGTCTTCTCCAAGAACTATGCTTCTTCAACATGGTGCTTGCGAGAATTGGAATACATTCTTCACTCCAGTCAACTGTATGGAAAACGTGTTCTGCCTGTTTTCTATGATGTCGATCCTTCTGAGGTGAGACATCAAAAAGGAAGTTATGGTGACGCCCTTGCCAAACATGAACAAAGATTCCAACATGATTCTCAGATGGTGCAAAGATGGAGGGAAGCTTTGACACAACTGGGGAATGTCTCTGGCTGGGATCTACGTGATAAGCCTCAATATGAAGAGATTGGCAAAATTGTTAAAGAGATAATGAATATATTGGGTCACAAATTTTCATCTCTTTCAAAAGAATTAGTTGGTATGAATTCTCCTATAGAAAAAGTAGTAAATCTATTACTTTTGGACTCGGTTGATGATGTTCGGGTTGTAGGAATTTGTGGGATGGGTGGAATAGGGAAGACAACTCTTGCTACTGCCTTATGTGGTCAAATCTCTCATCAATTTGATGCACGTTGTTTTATTGATGATCTAAGCAAAATATATAGACATGATAGTCCAATTGGTGCACAAAAGCAAATCCTACACCAAACTCTTGGCGAGGAACACTTTCAGATGTGCAATCTCTTTGACACGACTAATTTGATACGAAGAAGGCTACGTCGCCTACGAGCACTTATAATTCTTGATAATGTTGATAAAGTTGAACAACTCGATAAATTAGAAGTGAGTCGTGAATGTTTAGGTGCGGGGAGTAGAATCATTATAATTTCTAGAGATGAGCATATTTTGAAAGAGTATGGAGTTGATGAAGTTTACAAAGTTCTACTCTTGAATGAGACCAACTCTCTTCAATTATTTTGTCAAAAGGCTTTCAAACTTGATCATATTATGAGTAGTTATGATAAATTGGTACTTGACACACTTTCTTATGCCAATGGCCTACCACTCACAATTAAAGTATTGGGCTCATTTTTGTTTGGTCGAGACATCAATGAATGGAAAAGTGCATTGGTTAGATTGAGCGAAAGTCCAAACAAAGATATCATGGATGTGCTGCGATTAAGTTTTGAAGGACTAGAGAATTTGGAAAAAGAAATATTTCTTGATATTGCTTGTTTTTTCGAAGAGAACAATGATGAATATGTTACTAATATTCTAAATTGTTGTGGATTTCATCCTGATATTGGATTAAGAATTCTCATTGATAAATCCCTTATAAGCATTGACCGATATGGTATTATTACAATGCATAGTTTGTTGGTAGAGTTGGGCAGGAAAATTGTTCAAGAAAATTCGACCAAAGACTTGAAAAAGTGGAGCAGGATGTGGCTCCCCAGACATTTTGACAATGTAATGCTGGAGAATATGATAAAGTAG 1614 0.3711 MASSSNSSSSALVTLPKRKNYYDVFVTFRGEDTRFNFTDHLFAALKRKGIFAFRDDTKLQKGESIAPELFHAIQVSQVFIVVFSKNYASSTWCLRELEYILHSSQLYGKRVLPVFYDVDPSEVRHQKGSYGDALAKHEQRFQHDSQMVQRWREALTQLGNVSGWDLRDKPQYEEIGKIVKEIMNILGHKFSSLSKELVGMNSPIEKVVNLLLLDSVDDVRVVGICGMGGIGKTTLATALCGQISHQFDARCFIDDLSKIYRHDSPIGAQKQILHQTLGEEHFQMCNLFDTTNLIRRRLRRLRALIILDNVDKVEQLDKLEVSRECLGAGSRIIIISRDEHILKEYGVDEVYKVLLLNETNSLQLFCQKAFKLDHIMSSYDKLVLDTLSYANGLPLTIKVLGSFLFGRDINEWKSALVRLSESPNKDIMDVLRLSFEGLENLEKEIFLDIACFFEENNDEYVTNILNCCGFHPDIGLRILIDKSLISIDRYGIITMHSLLVELGRKIVQENSTKDLKKWSRMWLPRHFDNVMLENMIK* 538
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mal7g3067 537 Gene3D - 185 349 IPR027417 -
Mal7g3067 537 SUPERFAMILY "Winged helix" DNA-binding domain 426 526 IPR036390 -
Mal7g3067 537 Pfam NB-ARC domain 203 425 IPR002182 GO:0043531
Mal7g3067 537 SUPERFAMILY Toll/Interleukin receptor TIR domain 19 164 IPR035897 -
Mal7g3067 537 Gene3D - 16 184 IPR035897 -
Mal7g3067 537 PRINTS Disease resistance protein signature 390 404 - -
Mal7g3067 537 PRINTS Disease resistance protein signature 297 311 - -
Mal7g3067 537 PRINTS Disease resistance protein signature 221 236 - -
Mal7g3067 537 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN 23 532 IPR044974 GO:0006952
Mal7g3067 537 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 191 449 IPR027417 -
Mal7g3067 537 SMART AAA_5 218 357 IPR003593 -
Mal7g3067 537 PANTHER DISEASE RESISTANCE PROTEIN (TIR-NBS-LRR CLASS), PUTATIVE-RELATED 23 532 - -
Mal7g3067 537 Gene3D - 355 439 IPR042197 -
Mal7g3067 537 ProSiteProfiles TIR domain profile. 20 186 IPR000157 GO:0007165
Mal7g3067 537 SMART till_3 21 161 IPR000157 GO:0007165
Mal7g3067 537 Pfam TIR domain 22 192 IPR000157 GO:0007165
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mal7g3067 Mal-Chr7 94314367 94316216 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mal7g3067 22 534 WRKY Transcription Factor Family AT4G12020 28.764 1.34e-53 194
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mal7g3067 - - mtr:MTR_4g080070 871.692