Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mal7g3047 ATGGAAGGTTTTGATTGGGGTTATGATATATTTGGAGATGGCACTGAGAGAATTGGTATAGATGGTTTTCAAGTTAACAATGAAGTAAATATTGGAAGTGGGTATGGTTCACCTTTCTCTCTGGTTTTGGATAGGGAGAGAGGGGAGCTTGTGGAAGCACCAGCTAAAATGGAACAAAAGGGTGTGTCCACTACTGAGAGAAGTGTTGAAGCTTTGAAGAACCATAGTGAAGCAGAGAGAAGAAGAAGAGCTAGGATTAATGCACATCTTGATACACTTCGCAGTGTTATTCCAGGTGCTTTGAAGATGGACAAAGCATCATTACTTGGTGAAGTTATTAGACATTTGAAAGAGCTAAAAAGGAATACAACAGAAGCATGTGAAGGTTTAATGATACCAAAGGACAATGATGAAATAAGCGTTGAAGAACAAGAGGGTGGTTGGAATGGTTTTCCTTTTTCAATTAAAGCATCACTATGTTGTGAATATCAACCAGGGTTATTGTCTAATATAAGACAAGCATTAGATGCTCTTCATCTCATCATCTTGAAGGCAGATATTGCAACTTTTGGAGGCAGAATGAAAAATGTCTTTGTTGTAATTAGCTGTGAAGAACAAAACTTTGATGGTGCTGAATACAGACAGTTTCTTGCTGGTTCTGTTCACCAAGCTCTTAAGTCTGTACTTAGTAGATTTTCTGTTTCACAGGACATGTTAGGAGCAAGAAAAAGAAGAAGGGTTTCTATATTCAGTTCTTCATCTTTAGAAGATTTCTTATAA 780 0.3731 MEGFDWGYDIFGDGTERIGIDGFQVNNEVNIGSGYGSPFSLVLDRERGELVEAPAKMEQKGVSTTERSVEALKNHSEAERRRRARINAHLDTLRSVIPGALKMDKASLLGEVIRHLKELKRNTTEACEGLMIPKDNDEISVEEQEGGWNGFPFSIKASLCCEYQPGLLSNIRQALDALHLIILKADIATFGGRMKNVFVVISCEEQNFDGAEYRQFLAGSVHQALKSVLSRFSVSQDMLGARKRRRVSIFSSSSLEDFL* 260
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mal7g3047 259 CDD ACT_UUR-ACR-like 158 229 - -
Mal7g3047 259 PANTHER TRANSCRIPTION FACTOR BHLH FAMILY-RELATED 9 258 - -
Mal7g3047 259 Gene3D - 65 127 IPR036638 GO:0046983
Mal7g3047 259 ProSiteProfiles Myc-type, basic helix-loop-helix (bHLH) domain profile. 70 119 IPR011598 GO:0046983
Mal7g3047 259 SMART finulus 76 125 IPR011598 GO:0046983
Mal7g3047 259 MobiDBLite consensus disorder prediction 56 80 - -
Mal7g3047 259 Pfam Helix-loop-helix DNA-binding domain 74 119 IPR011598 GO:0046983
Mal7g3047 259 SUPERFAMILY HLH, helix-loop-helix DNA-binding domain 74 123 IPR036638 GO:0046983
Mal7g3047 259 PANTHER TRANSCRIPTION FACTOR BHLH30 9 258 IPR045847 GO:0003700|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mal7g3047 Mal-Chr7 93926198 93927651 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mal7g3047 2 248 Basic Helix-Loop-Helix Transcription Factor Gene Family AT1G68810 40.698 2.33e-37 133
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bHLH Mal7g3047 HLH 1.3e-10 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mal7g3047 - - gmx:100788819 386.726
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mal7g3047 7 93926198 93927651 Mal7g3047 7 93926198 93927651 ECH