Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mal7g3040 ATGAAAATTCAAGTAGCCCATATATGGACCATTCCTGACAAGGATCATGCTAATGAAATTAGCTTTATGAATCTTCTGTTGGTTGATGAAAAGGCTGGGAAGATCCACGCAACAGTCAGAAAGACATTGGTGTCAAAATTTCGATCCATGGTTGAAGAGGGATCTACTTACATCCTTGAAAAGGTTATGGTTGGTTTTAATGTGGGAACTTTCAAACTCACAAAACATAAATATAAGATCAACTTGATGCAAAATTCGACGTTTACGAAGATATCAAATGCCAACAACATACCATTGAATCACTTTGATTTCATGTCTTTCGCATCAATTTTGGAATCGTCAGAAGAAGGAAAGACAGTTGATATAATTGGTCATGTGATTGAAAAGGATGCACTAAGGGAAACCGAAAAAAAAAAGAATAAAGTTATTGACCTTACCCTGGAAGACTTGGAAAACCGTCGAATTATGTGCTCTTTATGGGGTGAATTTGCTGATAAGATGGTGAATTACTTTGAGTCTTATGATATGCCATCTCCTATCATAATGATAATTATGGGAGTATCAAACTCATTTTATGGTTCAAAACTTATAATTTAA 597 0.3467 MKIQVAHIWTIPDKDHANEISFMNLLLVDEKAGKIHATVRKTLVSKFRSMVEEGSTYILEKVMVGFNVGTFKLTKHKYKINLMQNSTFTKISNANNIPLNHFDFMSFASILESSEEGKTVDIIGHVIEKDALRETEKKKNKVIDLTLEDLENRRIMCSLWGEFADKMVNYFESYDMPSPIIMIIMGVSNSFYGSKLII* 199
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mal7g3040 198 Gene3D - 1 90 IPR012340 -
Mal7g3040 198 SUPERFAMILY Nucleic acid-binding proteins 5 95 IPR012340 -
Mal7g3040 198 CDD RPA1_DBD_A_like 1 88 - -
Mal7g3040 198 Pfam Domain of unknown function DUF223 25 114 IPR003871 -
Mal7g3040 198 SUPERFAMILY Nucleic acid-binding proteins 101 192 IPR012340 -
Mal7g3040 198 PANTHER REPLICATION FACTOR A 1, RFA1 9 196 IPR004591 GO:0003677|GO:0005634|GO:0006260|GO:0006281|GO:0006310
Mal7g3040 198 Gene3D - 95 198 IPR012340 -
Mal7g3040 198 CDD RPA1_DBD_B_like 121 198 - -
Mal7g3040 198 PANTHER BNAC08G15530D PROTEIN 9 196 - -
Mal7g3040 198 Coils Coil 133 153 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mal7g3040 Mal-Chr7 93874667 93875670 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mal7g3040 27 165 Core DNA Replication Machinery Family AT5G45400 26.531 1.50e-09 55.1
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mal7g3040 - - mtr:MTR_7g451880 216.083