Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mal7g3026 ATGGGAGGTTTTCCGTTAGGTTCAAAGAAGAAGAAAAACAACAAGAATCAACACGGTTTCGAAACCCTAGGTCTAAATCGCGATGTTTTCAGTGGAATCAAACGCAAAGGATACAAAGTTCCCACTCCAATTCAGAGGAAAACGATGCCTCTCATTCTCTCTGGAATCGATGTAGTTGCTATGGCGCGTACCGGTTCTGGTAAAACGGCGGCGTTTCTTGTTCCGATGCTTCACCGACTCAATCAGCATCTTCCTCAGGGTGGTGTTAGAGGACTTATTTTGTCACCGACTCGAGACTTGGCGCAACAGACATTGAAGTTCACCAAAGAGCTTGGTCACTTCACAGACCTTCGTGTTAGTTTGTTAGTTGGTGGTGATAGTATGGAAAGTCAGTTTGAGGAGTTATCTCAGAATCCTGACATTATAATTGCCACTCCCGGTAGGCTCATGCACCATTTGTCTGAGGTTGATGACATGTCCTTGCGTAAGGTTGAGTACGTTGTCTTTGATGAGGCGGATTGTTTATTTGGTATGGGTTTTGCTGAGCAGCTCCATCAAATTCTTGCTCAGCTTGGTGAGAACCGTCAAACCTTGCTTTTCAGTGCCACATTACCCAGCGCTCTTGCAGAATTTGCTAAGGCCGGTCTGCGAGACCCTCGTCTTGTTCGCCTCGATTTGGAAACTAAAATCAGCCCCGACTTGAAGCTTGTCTTTTTCACTTTGAGGCAGGAAGAGAAGTATGCTGCTTTGCTCTATTTAATTAGGGAACTTATCGGTTCTGATGAGCAGACTTTAATTTTTGTATCCACTAAACATCACGTTGAATTTCTCAACTCGCTGTTTCAACAAGAGGGTATTAGGCCTTCTGTATGTTATGGAGACATGGATCAAGATGCTCGCAAAGAACATGTGGCCAGGTTTAGATCAAGAAAGACAATGTTGTTGATTGTCACCGACATTGCTGCTCGGGGCATTGACATTCCATTGCTTGATAACGTTATCAATTGGGACTTCCCTCCTAAGCCTAAAATATTTGTTCATCGAGTTGGAAGGGTTGCAAGGGCTGGTCGTACTGGTACCGCATATTCTTTCTTGACTGCTGAGGATATGGCTTATCTCTTGGATCTTCATTTGTTTCTCTCCAAACCTGTCAAAGCTGCTCCCACCGAGGAAGAGGTCCTGCAGGACATGGATGGAGTGATGTCAAGAATTGACGAGGCAATGGCAAACGGAGAAACCATTTATGGTCGTTTCCCTCAAAAAGCCATTGATCTTGTTTCTGACAGAGTTAGGGAAGTTATTGATACTTCTGCGGAGCTGGAAGCATTGCAGAGAGCCTGTAAAAATGCATTTCGTTTATATTCTAAAACAAAACCCTTACCCTCAAAGGAATCCATTAGAAGAGTAAAGGATTTGCCACATGAAGGTTTGCATCCGATTTTCAACAAAGTGTTGGGAACGGGGGAGTTAACGGCACTTGCATTTTCTGAGCATTTGAAAAACTTTAGGCCAAAGCAGACCATTTTGGAAGCGGAAGGAGAAGCAGCTAAAGCCAAGCGTAGAGCAGGCCCTTCTGGTCTATGGGTTGATGTGATGAAAAGGAAAAGAGCTGTTCATGATAATATTATAACTAATGAACACCATTCGAAGAGTATTAGTGAAAAGGAGGAAAATCAATCGGAAATTACTTCTTCCATGGATAAAGGGAGAAAAGCACGTGGTTCTAAGCGAAAGCCAGAAAGTTTCAAGGACGAGGAATTCTTTATAAGTTCCATACCTCAAAATCAACACATGGAGGCAGGCCTCGCGGTAAAAGCTAATGAAGGCTTTTCTTCAAACAGATTGGATGATGCTGTCCTAGATCTAGGCGCAGATGATGGTGCTGGCATTAAGAAACAAAAATCTGTATATCACTGGGATAAGAGGAGTAAAAAGTATATCAAGTTAAACAATGGTGATCGTGTTGCTGCAAATGGAAAGATAAAGACAGAGAGTGGTGCAAAAACAAAGGCCAACAAGACTGGTATATATAAAAAGTGGAAGGAACGCTCGCACTCCAAGATATCTCTTAAAGGGACAAGTGCTGATGGCGATGCTCCGGAATCAAGTTCAAGAGGATCTTACCGAGGAGGTGGTAGGAATTACAAAGGCGGGAAGAAGCAGCATTCAATGCCCAATGCTCATGTGCGTTCAGAAATCAAAGATATGGATCAAATTCGAAAGGAGAGGCAGAAGAAAGCCAGCAAAATTTCTTATATGAAGAGCAAGTCGCCAAAGGGTAAAAAATCTGGCAGAAAGGGAGGAAAGGGAGGAAATAAAAGAAAATCAAAGTAG 2334 0.431 MGGFPLGSKKKKNNKNQHGFETLGLNRDVFSGIKRKGYKVPTPIQRKTMPLILSGIDVVAMARTGSGKTAAFLVPMLHRLNQHLPQGGVRGLILSPTRDLAQQTLKFTKELGHFTDLRVSLLVGGDSMESQFEELSQNPDIIIATPGRLMHHLSEVDDMSLRKVEYVVFDEADCLFGMGFAEQLHQILAQLGENRQTLLFSATLPSALAEFAKAGLRDPRLVRLDLETKISPDLKLVFFTLRQEEKYAALLYLIRELIGSDEQTLIFVSTKHHVEFLNSLFQQEGIRPSVCYGDMDQDARKEHVARFRSRKTMLLIVTDIAARGIDIPLLDNVINWDFPPKPKIFVHRVGRVARAGRTGTAYSFLTAEDMAYLLDLHLFLSKPVKAAPTEEEVLQDMDGVMSRIDEAMANGETIYGRFPQKAIDLVSDRVREVIDTSAELEALQRACKNAFRLYSKTKPLPSKESIRRVKDLPHEGLHPIFNKVLGTGELTALAFSEHLKNFRPKQTILEAEGEAAKAKRRAGPSGLWVDVMKRKRAVHDNIITNEHHSKSISEKEENQSEITSSMDKGRKARGSKRKPESFKDEEFFISSIPQNQHMEAGLAVKANEGFSSNRLDDAVLDLGADDGAGIKKQKSVYHWDKRSKKYIKLNNGDRVAANGKIKTESGAKTKANKTGIYKKWKERSHSKISLKGTSADGDAPESSSRGSYRGGGRNYKGGKKQHSMPNAHVRSEIKDMDQIRKERQKKASKISYMKSKSPKGKKSGRKGGKGGNKRKSK* 778
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mal7g3026 777 Pfam DBP10CT (NUC160) domain 621 682 IPR012541 GO:0003723|GO:0003724|GO:0005524|GO:0005634
Mal7g3026 777 MobiDBLite consensus disorder prediction 1 20 - -
Mal7g3026 777 MobiDBLite consensus disorder prediction 750 777 - -
Mal7g3026 777 MobiDBLite consensus disorder prediction 541 586 - -
Mal7g3026 777 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 88 374 IPR027417 -
Mal7g3026 777 ProSiteProfiles Superfamilies 1 and 2 helicase C-terminal domain profile. 246 395 IPR001650 -
Mal7g3026 777 PANTHER ATP-DEPENDENT RNA HELICASE RHLE-RELATED 10 771 - -
Mal7g3026 777 SMART ultradead3 37 237 IPR014001 -
Mal7g3026 777 MobiDBLite consensus disorder prediction 725 749 - -
Mal7g3026 777 CDD SF2_C_DEAD 244 365 - -
Mal7g3026 777 MobiDBLite consensus disorder prediction 660 777 - -
Mal7g3026 777 SMART DBP10CT_2 621 683 IPR012541 GO:0003723|GO:0003724|GO:0005524|GO:0005634
Mal7g3026 777 ProSiteProfiles Superfamilies 1 and 2 helicase ATP-binding type-1 domain profile. 49 222 IPR014001 -
Mal7g3026 777 CDD DEADc_DDX54 19 223 - -
Mal7g3026 777 Gene3D - 235 464 IPR027417 -
Mal7g3026 777 ProSiteProfiles DEAD-box RNA helicase Q motif profile. 18 46 IPR014014 GO:0003724
Mal7g3026 777 Gene3D - 5 225 IPR027417 -
Mal7g3026 777 Pfam DEAD/DEAH box helicase 42 209 IPR011545 GO:0003676|GO:0005524
Mal7g3026 777 PANTHER DEAD-BOX ATP-DEPENDENT RNA HELICASE 29 10 771 - -
Mal7g3026 777 MobiDBLite consensus disorder prediction 675 689 - -
Mal7g3026 777 MobiDBLite consensus disorder prediction 541 585 - -
Mal7g3026 777 Pfam Helicase conserved C-terminal domain 246 356 IPR001650 -
Mal7g3026 777 SMART helicmild6 275 356 IPR001650 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mal7g3026 Mal-Chr7 93635837 93646100 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mal7g3026 20 389 Eukaryotic Initiation Factors Gene Family AT1G72730 32.258 8.65e-57 198
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mal7g3026 K14808 - gmx:100806274 1223.38