Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mal7g3012 ATGCTAAAAAAGATGGATGAAGTAGAAATCACAAATGTTAATTTCCCTCAAAATCTAACAACTAGTGCTTCTAATAATCCTCCTACTTTGAAGAGAAAAAGAAACCTCCCAGGAAATCCAGATCCTGAAGCAGAAGTTATAGCTTTATCACCAAAGACTTTGATGGCTACAAACAGATTCTTGTGTGAAACATGTGGGAAAGGTTTTCAAAGAGATCAAAATCTACAACTCCATAGACGCGGACATAATCTTCCATGGAAGCTTAAGCAGAGAACAAACAAAGAAATAAAGAAGAGAGTTTATGTTTGTCCAGAGAAGAGTTGTGTACACCATGATCCTTCAAGGGCACTTGGTGACTTAACTGGGATAAAAAAGCACTTTTGTAGAAAGCATGGTGAAAAGAAATGGAAGTGTGAGAAGTGCTCAAAACGTTATGCTGTTCAGTCAGATTGGAAAGCTCACTCAAAAACTTGTGGTACTAGAGAATACAAATGTGACTGTGGAACTATCTTTTCAAGGAGAGACAGCTTCATAACTCACAGAGCCTTTTGTGATGCCTTAGCTGAAGAAACAGCAAGGGTAAGTGCAGCATCAGAAATAAACAACAGCTCATTATTAAGGGGTAACATTGGTAATTACACCAACATAATGGGAACAACATCTTTAGTCACTAACAACAACATGCAAACTCATTTTCCTTCAATTTTCAAACCAATTTCATCAACTCTTGATCATCATCATGAAACAACGAATCAAACTAGAGGACTATCCCTTTGGATGAATCAAACATCTCAGCCTCATGAAACAATGATCACCACCACAAATGTAAATTCTAATTTGCATGAGATTCATCAACAACTTGACACATCATCAAGAGGATTAATGTATGGTGGAAATGAGAATCCACACTCTAATAATTATCAGCTAAATTGGGTTTTTGGAAATAAACTTTCCTCAAATTGCAGCCAAGAATTAATTACTAGCACTACAACATCACTTCCACTAGGAAACATTAATGTTAATGTTAAGGATGTTTCTCATGATGCTACAAGTCAACAAATTTCTTCCTTGTATAGCTCACAACACCAAATCTTATCACATCAAACATCTTCAGCAAACATGTCAGCTACAGCTTTGTTACAAAAAGCTGCTCAAATTGGATCAACCTCAAGTGACACATCATTCCTTGGAAGTTTAGGTTTGAAATGCAGTAATAATAGTAATATTGATGTGAACAAGTTTGGTGGTAATGCTATGTATGGTACTTCAAGTTCATTACTCATTAGTCTTGGCAATGAGGAAGATCATAACTCTGCATGTGATTTTTCACAAATGCACCCTTCCAAACGTAGACATGTGCAGAGTGAAGAGAATGGAGGAGGAGGGCAAACTAGGGATTTTCTTGGTGTAGGTGTGCAAACCATTTGTCACCCTTCATCAATCAACGGTTGGATTTGA 1458 0.3683 MLKKMDEVEITNVNFPQNLTTSASNNPPTLKRKRNLPGNPDPEAEVIALSPKTLMATNRFLCETCGKGFQRDQNLQLHRRGHNLPWKLKQRTNKEIKKRVYVCPEKSCVHHDPSRALGDLTGIKKHFCRKHGEKKWKCEKCSKRYAVQSDWKAHSKTCGTREYKCDCGTIFSRRDSFITHRAFCDALAEETARVSAASEINNSSLLRGNIGNYTNIMGTTSLVTNNNMQTHFPSIFKPISSTLDHHHETTNQTRGLSLWMNQTSQPHETMITTTNVNSNLHEIHQQLDTSSRGLMYGGNENPHSNNYQLNWVFGNKLSSNCSQELITSTTTSLPLGNINVNVKDVSHDATSQQISSLYSSQHQILSHQTSSANMSATALLQKAAQIGSTSSDTSFLGSLGLKCSNNSNIDVNKFGGNAMYGTSSSLLISLGNEEDHNSACDFSQMHPSKRRHVQSEENGGGGQTRDFLGVGVQTICHPSSINGWI* 486
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mal7g3012 485 Gene3D Classic Zinc Finger 56 83 - -
Mal7g3012 485 ProSiteProfiles Zinc finger C2H2 type domain profile. 60 82 IPR013087 -
Mal7g3012 485 Gene3D Classic Zinc Finger 94 184 - -
Mal7g3012 485 MobiDBLite consensus disorder prediction 16 32 - -
Mal7g3012 485 PANTHER SERINE/THREONINE-PROTEIN KINASE RIO 5 482 - -
Mal7g3012 485 MobiDBLite consensus disorder prediction 16 40 - -
Mal7g3012 485 SUPERFAMILY beta-beta-alpha zinc fingers 59 156 IPR036236 -
Mal7g3012 485 PANTHER F-BOX ASSOCIATED PROTEIN 5 482 - -
Mal7g3012 485 ProSitePatterns Zinc finger C2H2 type domain signature. 62 82 IPR013087 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mal7g3012 Mal-Chr7 93480998 93483259 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mal7g3012 26 485 IDZ Gene Family AT1G03840 53.877 2.69e-158 457
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF C2H2 Mal7g3012 None None None
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mal7g3012 K25870 - gmx:100790620 616.305
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mal7g3012 7 93480998 93483259 Mal7g3012 7 93480998 93483259 ECH