Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mal7g3006 ATGATTGCAGTGTCACCATTGAGGAACAACAAAGATGGAAACCAAGAAGAGATGGAGAGTTTTTCAATTACAACCGGTGACTTCGGCGACCTTTCTGACGGGAATTTATTGGAAAGCACCAACTTTGACGACTTCTTTGTTGGCATCAACGTCGATGGAGACATCTTGCCGGATTTGGAGATGGATCCAGAGATGTTTGCTGAGTTCTCCGTCAGTTACGGCGAGGAATCAGAGATGAATTCCTCGGCGTCCTTGGAGAACAACATCAAACTAGAAGAGAAGAATTCAAAGAAATGCTATGAAGATAAAACAGATTGTTCGCGTCAAGGCTCGGAAGAGATAGTGAGTAAAAGGGATGAATCCGTGGTTGTGAATCCATTGTTAAAAGATGCAGGTGGAAAAGGAAGAAAATCATCGACTAAATCTAAGAATCCTCAAGGGAAGAGAAAAGTCAAGGTGGATTGGACACCAGAATTGCACAGGAGATTTGTGCAAGCTGTGGAACAGCTAGGGGTGGATAAGGCGGTGCCTTCAAGGATTTTGGAGATTATGGGAATTGATTGTCTCACTCGCCATAATATTGCCAGTCACCTTCAGAAATATAGGTCACATAGAAAACATTTGCTAACGCGTGAAGCAGAAGCAGCAAGTTGGAATCAAAGGAGACAAGTGTATGGTGGTGTAGGAGGGAAGAGAGAAGTGATGAGTCCATGGCCAGCTGCACCCACTATGGGTTTTCCTCCTCCTCCAATGACAACTCCATTGCACCATTTTAGACCCTTACATGTATGGGGACATCCTTCAATGGACCACTCTTTTATGCATATGTGGCCTAAACCGCAGCCAGCTCTCTCATGGCCACCATCAGCAGCTCCTCCACCTCCACCTCAAGACCCTTCATTTTGGCATTCTCACCACCAACGGACACCAACAAGCACAATAATCCCAGGAATACATTGTTTCCCACAACCTCTGACAACAATGAGACCATCATTTGGATGTCCAATCCCCGGCATTAGCGCCCCTGGTCCTGCTCCTGCTCCTGCTCCCTTCGACTTCCATCCGTCAAAGGAGAGCATAGACGCAGCTATTGGAGATGTTTTATCAAAACCATGGTTGCCGCTACCACTTGGACTTAAAGCTCCAGCACTTGATAGCGTAATGGGTGAACTACAAAGACAGGGAGTTTCAAACATTCCACCCTAG 1206 0.461 MIAVSPLRNNKDGNQEEMESFSITTGDFGDLSDGNLLESTNFDDFFVGINVDGDILPDLEMDPEMFAEFSVSYGEESEMNSSASLENNIKLEEKNSKKCYEDKTDCSRQGSEEIVSKRDESVVVNPLLKDAGGKGRKSSTKSKNPQGKRKVKVDWTPELHRRFVQAVEQLGVDKAVPSRILEIMGIDCLTRHNIASHLQKYRSHRKHLLTREAEAASWNQRRQVYGGVGGKREVMSPWPAAPTMGFPPPPMTTPLHHFRPLHVWGHPSMDHSFMHMWPKPQPALSWPPSAAPPPPPQDPSFWHSHHQRTPTSTIIPGIHCFPQPLTTMRPSFGCPIPGISAPGPAPAPAPFDFHPSKESIDAAIGDVLSKPWLPLPLGLKAPALDSVMGELQRQGVSNIPP* 402
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mal7g3006 401 PANTHER TRANSCRIPTION ACTIVATOR GLK1 1 401 IPR044825 GO:0003700|GO:0045893
Mal7g3006 401 MobiDBLite consensus disorder prediction 1 25 - -
Mal7g3006 401 Gene3D - 147 208 - -
Mal7g3006 401 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 147 206 IPR017930 -
Mal7g3006 401 PANTHER TRANSCRIPTION FACTOR MYB-HB-LIKE FAMILY-RELATED 1 401 - -
Mal7g3006 401 MobiDBLite consensus disorder prediction 127 150 - -
Mal7g3006 401 MobiDBLite consensus disorder prediction 8 25 - -
Mal7g3006 401 MobiDBLite consensus disorder prediction 284 308 - -
Mal7g3006 401 SUPERFAMILY Homeodomain-like 148 207 IPR009057 -
Mal7g3006 401 Pfam Myb-like DNA-binding domain 153 202 IPR001005 -
Mal7g3006 401 TIGRFAM myb_SHAQKYF: myb-like DNA-binding domain, SHAQKYF class 150 204 IPR006447 GO:0003677
Mal7g3006 401 MobiDBLite consensus disorder prediction 284 300 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mal7g3006 Mal-Chr7 93397974 93402553 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mal7g3006 1 282 G2-like Transcription Factor Family AT5G44190 44.068 9.06e-61 198
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF GARP-G2-like Mal7g3006 Myb_DNA-binding 5e-08 CL0123
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mal7g3006 7 93397974 93402553 Mal7g3006 7 93397974 93402553 ECH