Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mal7g2998 ATGGTTACCAAAACAAAGAACAACGCCAATCTCAAAATCAAAAAGCCTTTCAACAACAACAACAACAATGCAACCGAGATTCACTTCCGCGGTGTAAGAAAGCGACCATGGGGCCGTTACGCCGCCGAGATTCGCGATCCCGGCAAGAAAAGTCGCGTTTGGCTCGGCACTTTCGACACCGCCGAAGAAGCCGCCAGAGCCTACGACAACGCCGCTCGTCAGTTCCGCGGCCCCAAAGCCAAGACCAATTTCCCTCCTCCTCCTCCTCCTTCCGACACCAAGGAAGATAGCCCCAGTCAGAGCAGCACCGTTGAATCATCCGCCCCCAACCCTGAGCGTGAAGTCACGCGCCCTCGTGAAGTTTCCGCCGGAGGTGGCGTCATGGATCGGTTTCCGTTTCTCTCGATTCAGCAACAGATCATGCCGTTTTCTGCCGGCGCTGGTGTCGGCGCCGGTGCTGTTGAGGGAATGGTGACTGCTATGCATCCGGTTTTCTTTTACGATCCAGCGGGTCGAGCTGAGTTTCTGAACAAGCGGTTTACTAACCGGTTTGAACCGGAACCGGTTCAGTTTAACATCGGGTTTGGCGGTGGTGGTGGTGGGGTCCAGAGTGATTCAGATTCATCATCTGTTGTTGATTGTCAGCCGAAGAGAGCTCTCAATCTTGATCTTAACTTAGCTCCACCATCGGAATATTAA 699 0.5351 MVTKTKNNANLKIKKPFNNNNNNATEIHFRGVRKRPWGRYAAEIRDPGKKSRVWLGTFDTAEEAARAYDNAARQFRGPKAKTNFPPPPPPSDTKEDSPSQSSTVESSAPNPEREVTRPREVSAGGGVMDRFPFLSIQQQIMPFSAGAGVGAGAVEGMVTAMHPVFFYDPAGRAEFLNKRFTNRFEPEPVQFNIGFGGGGGGVQSDSDSSSVVDCQPKRALNLDLNLAPPSEY* 233
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mal7g2998 232 MobiDBLite consensus disorder prediction 1 24 - -
Mal7g2998 232 SMART rav1_2 28 91 IPR001471 GO:0003700|GO:0006355
Mal7g2998 232 PANTHER AP2 DOMAIN CLASS TRANSCRIPTION FACTOR 18 221 - -
Mal7g2998 232 MobiDBLite consensus disorder prediction 73 124 - -
Mal7g2998 232 Pfam AP2 domain 28 77 IPR001471 GO:0003700|GO:0006355
Mal7g2998 232 Gene3D AP2/ERF domain 28 86 IPR036955 GO:0003700|GO:0006355
Mal7g2998 232 PRINTS Ethylene responsive element binding protein signature 51 67 IPR001471 GO:0003700|GO:0006355
Mal7g2998 232 PRINTS Ethylene responsive element binding protein signature 29 40 IPR001471 GO:0003700|GO:0006355
Mal7g2998 232 PANTHER ERF FAMILY PROTEIN 18 221 - -
Mal7g2998 232 MobiDBLite consensus disorder prediction 95 110 - -
Mal7g2998 232 CDD AP2 28 84 IPR001471 GO:0003700|GO:0006355
Mal7g2998 232 ProSiteProfiles AP2/ERF domain profile. 28 85 IPR001471 GO:0003700|GO:0006355
Mal7g2998 232 SUPERFAMILY DNA-binding domain 28 85 IPR016177 GO:0003677
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mal7g2998 Mal-Chr7 93313310 93314008 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mal7g2998 26 229 AP2-EREBP Transcription Factor Family AT5G44210 46.860 3.90e-49 158
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF AP2/ERF-ERF Mal7g2998 AP2 4.6e-15 CL0081
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mal7g2998 K09286 - gmx:100801924 213.386
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mal7g2998 7 93313310 93314008 Mal4g1475 4 22567892 22568524 ECH
Mal7g2998 7 93313310 93314008 Mal7g2998 7 93313310 93314008 ECH
Mal7g2998 7 93313310 93314008 Mal4g4045 4 116105125 116105748 ECH