Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mal7g2996 ATGAGTAGTGTACTTTGTGAAGAGCAACAAAAGCTTCTTCTTTCCCTCAAAAAGTCTCTCACTCTAAGGGACACTATCATGGACAACATCCCACCAAGGAAGCTACTCACCCGCCGTCCACCACCCACCACCGCCGTCACCGACATGTTTTCCGATGAGGATCCATATTCCTCTGACCACTTTCGTATGTACGAGTTCAAAATCCGGCGATGCACCCGAAGCAGGAGTCATGACTGGACTGACTGTCCTTTCGCCCATCCGGGCGAAAAGGCTCGCCGTCGTGACCCCCTCAGGTATCAGTACTCCGGTGAGGTGTGTCCTGATTACCGCCGCGGAAACTGCGACCGCGGCGATGCGTGTGAATTCTCACACGGGGTTTTTGAGTGCTGGTTGCACCCTTCAAGGTATAGAACTGAAGCTTGTAAAGATGGTAAAAATTGTAAGCGCAAAATTTGTTTTTTTGCTCATACACCCCGTCAACTCAGAGTTTTGCTTTTGCCACCCCCTCCTCCTTCTCCTACACCTCCTCAAAAAAACAACAAAAATTGTTGTTCTTTTTGTCATTGCTGTTCAAATTCTTCATCACCCACTTCTACTTTGTTAAGTGGGCCCCATTTTTCTTCTTCAAATTCACCACCTTTGTCACCTTTGTCGAATTCAAATTCCAAAGATGTGCATGTGCTTAATGAGCTTATTCGTTCTATGGAGAATAGTTTCAATTTTGGTGGTGATGATAATTATGAGGCTAATTCAGCTTCTAAAGTGAATTGGATTAATAATAATATCAATAATTCTTCTTTGGGTTGTGGAAAATATTATAATCCAAGTGGTAGTGGCAAGTTTTTGAGGGAAGATGAGAGGATTAAGGTTGTTGAAAATGATGTCACACCAGATTTTGGGTGGGTGAATGAGTTGCTGATGTAG 924 0.4394 MSSVLCEEQQKLLLSLKKSLTLRDTIMDNIPPRKLLTRRPPPTTAVTDMFSDEDPYSSDHFRMYEFKIRRCTRSRSHDWTDCPFAHPGEKARRRDPLRYQYSGEVCPDYRRGNCDRGDACEFSHGVFECWLHPSRYRTEACKDGKNCKRKICFFAHTPRQLRVLLLPPPPPSPTPPQKNNKNCCSFCHCCSNSSSPTSTLLSGPHFSSSNSPPLSPLSNSNSKDVHVLNELIRSMENSFNFGGDDNYEANSASKVNWINNNINNSSLGCGKYYNPSGSGKFLREDERIKVVENDVTPDFGWVNELLM* 308
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mal7g2996 307 Pfam Zinc finger C-x8-C-x5-C-x3-H type (and similar) 104 125 IPR000571 GO:0046872
Mal7g2996 307 Gene3D - 99 164 - -
Mal7g2996 307 PANTHER UNKEMPT FAMILY MEMBER 47 236 IPR045234 -
Mal7g2996 307 SMART c3hfinal6 100 126 IPR000571 GO:0046872
Mal7g2996 307 SMART c3hfinal6 135 158 IPR000571 GO:0046872
Mal7g2996 307 ProSiteProfiles Zinc finger C3H1-type profile. 100 127 IPR000571 GO:0046872
Mal7g2996 307 PANTHER ZINC FINGER CCCH DOMAIN-CONTAINING PROTEIN 2 47 236 - -
Mal7g2996 307 MobiDBLite consensus disorder prediction 201 220 - -
Mal7g2996 307 SUPERFAMILY CCCH zinc finger 99 129 IPR036855 GO:0046872
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mal7g2996 Mal-Chr7 93292706 93293629 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mal7g2996 52 263 C2H2 Transcription Factor Family AT5G07500 41.176 1.57e-51 168
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF C3H Mal7g2996 zf-CCCH 2.1e-06 CL0537
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mal7g2996 K23047 - gmx:100820375 270.781
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mal7g2996 7 93292706 93293629 Mal7g2996 7 93292706 93293629 ECH