Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mal7g2979 ATGGATCAAGTTGGAAGTGATCAACCTTCTAGCTCTACAAAAAAAGTTGAAAGAAGACTCGTGGAGAAAAACAGAAGAAATCAAATGAAGATCCTTTACTCCAAACTCAATTCTCTTCTCCCTAACTACAACCCCAAGGAATTAGCGTTGGCGTTACCGGAACAAGTAGATGAGGCAATAAACTACATAAAAAGTTTAGAGGCAAATGTGAAGATGGCTAAGGAGAAGAAAGAGAGGTTATTAGCTGGAAAGAGTAAAAGATCACGTGAATATTGCTTGGGTCTACCAAAATCACCACGTTTTGAAATTCACGAAACTGGTTCTTCTCTTCAAATCATTCTCACGTGTGGATTAGATAACCAATTCATTTTCTATGAAATCATTCGTGTGTTGCATGAAGAAGAGAATGTAGATGTAAGGAGTGTCAATTCCTCAACGGTTGGAGATAATTCATTCCTTCATGTTGTTCATGCTGAGATTCCTCAATCTTGTGTTCAATTTGGAGCGACGAAAGTGAGTGAGAGATTGAAAAAGGTTTGTGAATGGATCTTCAAGTGA 558 0.3781 MDQVGSDQPSSSTKKVERRLVEKNRRNQMKILYSKLNSLLPNYNPKELALALPEQVDEAINYIKSLEANVKMAKEKKERLLAGKSKRSREYCLGLPKSPRFEIHETGSSLQIILTCGLDNQFIFYEIIRVLHEEENVDVRSVNSSTVGDNSFLHVVHAEIPQSCVQFGATKVSERLKKVCEWIFK* 186
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mal7g2979 185 Gene3D - 4 92 IPR036638 GO:0046983
Mal7g2979 185 SUPERFAMILY HLH, helix-loop-helix DNA-binding domain 11 82 IPR036638 GO:0046983
Mal7g2979 185 PANTHER ACHAETE-SCUTE TRANSCRIPTION FACTOR-RELATED 10 181 IPR015660 GO:0003700|GO:0006357
Mal7g2979 185 Pfam Helix-loop-helix DNA-binding domain 14 67 IPR011598 GO:0046983
Mal7g2979 185 Coils Coil 56 83 - -
Mal7g2979 185 ProSiteProfiles Myc-type, basic helix-loop-helix (bHLH) domain profile. 13 66 IPR011598 GO:0046983
Mal7g2979 185 PANTHER HELIX LOOP HELIX DNA-BINDING DOMAIN PROTEIN 10 181 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mal7g2979 Mal-Chr7 93081102 93081969 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mal7g2979 8 183 Basic Helix-Loop-Helix Transcription Factor Gene Family AT4G20970 39.583 1.09e-32 114
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bHLH Mal7g2979 HLH 1.2e-05 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mal7g2979 - - gmx:100817883 242.662
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mal7g2979 7 93081102 93081969 Mal7g2979 7 93081102 93081969 ECH