LGRPv2

Gene search

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Mal7g2969	ATGGGAGGTGGAGGAGGTAACAATGAAGAAGAAAACAAGTGGCCACCATGGTTGCAACCACTTCTTCAAACAAGTTTCTTTGTTCAATGCAAAGTCCACTCAGATTCACACAAGAGTGAATGCAATATGTATTGCTTGGATTGTAACAATGGAGCCCTTTGTTCTGCTTGTCTTGCTTCTCACAAACAACATAGAACAATTCAGATAAGGAGGTCTTCATACCATGATGTGATAAGGGTTTCTGAGATACAGAAATTTCTGGACATAGCAGAGGTTCAAACTTATGTTATAAACAGTGCAAAGATTGTGTTTTTGAATGAAAGGCCTCAACCTAGGCCTGGAAAAGGGGTCACCAATACCTGCCAAGTCTGTGACCGTAGCCTCCTTGATTCCTTCAGCTTCTGCTCTCTTGGTTGTAAGATTGTTGGAACCTCCAAGAAGTTGAGGAAGAATAAAATGTTGAGTCAGAAAGATGGGTCTGATGGTGAAGAGTCAATGAATGGCATTAGCAATGGAAGTGGCAGAAACAGAATTCATAGCTTTACACCTTCAACACCACCTCCAACAGTGGTGAATTACAGAACAGTTAAGAGGAGGAAAGGAATTCCACATAGAGCTCCAATGGGGGGAGGAATCATTATAGAATTCTAA	651	0.4132	MGGGGGNNEEENKWPPWLQPLLQTSFFVQCKVHSDSHKSECNMYCLDCNNGALCSACLASHKQHRTIQIRRSSYHDVIRVSEIQKFLDIAEVQTYVINSAKIVFLNERPQPRPGKGVTNTCQVCDRSLLDSFSFCSLGCKIVGTSKKLRKNKMLSQKDGSDGEESMNGISNGSGRNRIHSFTPSTPPPTVVNYRTVKRRKGIPHRAPMGGGIIIEF*	217

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Mal7g2969	216	PANTHER	PLATZ TRANSCRIPTION FACTOR FAMILY PROTEIN	2	211	-	-
	Mal7g2969	216	MobiDBLite	consensus disorder prediction	160	190	-	-
	Mal7g2969	216	PANTHER	PLATZ TRANSCRIPTION FACTOR FAMILY PROTEIN	2	211	-	-
	Mal7g2969	216	MobiDBLite	consensus disorder prediction	152	190	-	-
	Mal7g2969	216	Pfam	PLATZ transcription factor	70	141	IPR006734	-

Duplication type information

Select	Gene	Chromosome	Start	End	Duplicated_type
	Mal7g2969	Mal-Chr7	92926548	92928153	Wgd

Transcription factors information

Select	Regulatory Factors	Family	Gene	Hmm_acc	Hmm_name	E_value	Clan
	TF	PLATZ	Mal7g2969		PLATZ	4e-29	No_clan

Pathway information

Select	Query	KO	Definition	Second KO	KEGG Genes ID	GHOSTX Score
	Mal7g2969	-		-	gmx:100792668	384.415

Event-related genes

Select	Gene_1	Chr_1	Start_1	End_1	Gene_2	Chr_2	Start_2	End_2	Event_name
	Mal7g2969	7	92926548	92928153	Mal6g0391	6	5165571	5167650	ECH
	Mal7g2969	7	92926548	92928153	Mal7g2969	7	92926548	92928153	ECH