Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mal7g2963 ATGGGGAGACCACCATGCAGTGCTGAAAGTGGTTTGAAAAAGGGACCTTGGACACCAGAAGAGGATAGAATATTGGTGAATCACATTCAGAAACATGGCCATGGAAGTTGGAGTGCACTTCCAAAGCTAGCAGGATTGAACAGATGTGGGAAGAGTTGCAGACTAAGGTGGACTAACTATTTAAGACCTGATATCAAAAGAGGAGAATTCACCGATGAAGAAGAGACAACCATCATCAATTTGCATGCTGTTCTTGGGAATAAGTGGTCAGCTATAGCAGGTCATCTACCAGGGAGGACTGATAATGAAATAAAGAATTTTTGGAACACTCATTTAAAGAAAAAGCTTCTTCAAATGGGCTTAGATCCAGTGACTCATCGTCCAAGAATTGATCATCTCAATCTCATGAACAATCTTCAACAGATTCTTGCTGCAAACATTCTCAATAATTTTCCAAACACTTGGGACATTGCTACTACTAATGCTCTTAGGCTTCACTCTGATGCAGCCAAATTCCAATTGCTTCAAAACATGGTTCAAATTCAAGCCCTTAGTGCCAATACTCCTGCTCCTACCTCAAACTTGCAATTACTCAATCCATTTAGACAATCTTCATCTTCATCACAGCAAGAAAATTTTCTGAATGAACTTTTAGAATTGAATAATCAGTCCAATTTTGCTTCTCTAAATCAGTGCAATTTTCAAAGCTTTGAAGTACCTCAGATGCAGCATGGTGTAAACAATGGTTATCAATTTATTGAGAATGGTGGCAGCAGTAATAGTAGTAGTTGCTTGAAGTCTGATCAAAAGGTTGATGAAGTATTTGATGGTATGAATTCTTCTTCGGTAGCGATAAATTCGCTACCGAATTTGGTTTCAGTTTCACCAGAATGTTCTGGTGTGAAAGAGATGATGGGAAACAAGGTGAACCAAAATGAGTGTTCAAATCCTTCTTCAACTTCAACTACCTTTGAAATGTTAGGAGATTTCATGTATGAGGATGTAAGCGATGCTTGTTGGAAAGATCTCTTGGAGTAA 1038 0.3854 MGRPPCSAESGLKKGPWTPEEDRILVNHIQKHGHGSWSALPKLAGLNRCGKSCRLRWTNYLRPDIKRGEFTDEEETTIINLHAVLGNKWSAIAGHLPGRTDNEIKNFWNTHLKKKLLQMGLDPVTHRPRIDHLNLMNNLQQILAANILNNFPNTWDIATTNALRLHSDAAKFQLLQNMVQIQALSANTPAPTSNLQLLNPFRQSSSSSQQENFLNELLELNNQSNFASLNQCNFQSFEVPQMQHGVNNGYQFIENGGSSNSSSCLKSDQKVDEVFDGMNSSSVAINSLPNLVSVSPECSGVKEMMGNKVNQNECSNPSSTSTTFEMLGDFMYEDVSDACWKDLLE* 346
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mal7g2963 345 CDD SANT 69 112 IPR001005 -
Mal7g2963 345 SMART sant 66 114 IPR001005 -
Mal7g2963 345 SMART sant 13 63 IPR001005 -
Mal7g2963 345 CDD SANT 16 61 IPR001005 -
Mal7g2963 345 PANTHER MYB TRANSCRIPTION FACTOR 4 345 - -
Mal7g2963 345 Gene3D - 69 116 - -
Mal7g2963 345 ProSiteProfiles Myb-like domain profile. 9 61 IPR001005 -
Mal7g2963 345 PANTHER MYB FAMILY TRANSCRIPTION FACTOR 4 345 - -
Mal7g2963 345 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 9 61 IPR017930 -
Mal7g2963 345 Gene3D - 11 67 - -
Mal7g2963 345 SUPERFAMILY Homeodomain-like 11 108 IPR009057 -
Mal7g2963 345 Pfam Myb-like DNA-binding domain 67 112 IPR001005 -
Mal7g2963 345 Pfam Myb-like DNA-binding domain 14 61 IPR001005 -
Mal7g2963 345 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 62 116 IPR017930 -
Mal7g2963 345 ProSiteProfiles Myb-like domain profile. 62 112 IPR001005 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mal7g2963 Mal-Chr7 92856754 92858250 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mal7g2963 1 345 MYB Transcription Factor Family AT5G16770 48.451 2.80e-98 292
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB Mal7g2963 Myb_DNA-binding 6.7e-16 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mal7g2963 K09422 - gmx:547488 435.261
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mal7g2963 7 92856754 92858250 Mal6g0382 6 5103724 5106465 ECH
Mal7g2963 7 92856754 92858250 Mal7g2963 7 92856754 92858250 ECH