Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mal7g2956 ATGACAGCTGGGATCGCGAATTACGTATTACCGCCATTCTTAAGCAAAACATACGATATGGTTGATGACTCTTCAACCGACTCAATCGTTTCATGGGGTAAAAACAACAACACCTTCGTCGTTTTCAATTCCACCGATTTCTCCAAATTCATCTTACCCAAATACTTCAAACACAATAACTTTTCCAGCTTCGTCCGACAATTGAACACCTACGGTTTTAGAAAGGTTGATCCAGACCGCTGGGAATTTGCACATGAAGGGTTTTTAAGGGGTCAAAAACAATTGTTGAAGACTATCACTAGGCGAAAATCTACTCATGCAAATGGTAATAATCAACAGTCATCTAAGGCGCTGAACCCACCCGTTGGGTCATGTGTTGAAGTGGGGAAGTTTGGGCTTGACGAAGAGGTTGAAAGACTGAAAAGGGATAAGAATGTTCTTATGCAGGAGCTTGTTAAGCTAAGGCAGCAACAACAATCGACTGATAACCAATTGCTAAATGTTGGGCAACGTGTGCAAGGGATGGAGCAGCGTCAGCAACAGATGATGTCGTTCTTGGCGAAGGCCATGAATAGTCCGGGCTTTATGGCTCAATTTTCACAGCAGCAGAGTGAAAGTAATAGACACGTTACCGCAGGTAAAAAGAGGCGGCTTCAGAGGCAGGAAGAAGATAGTTTAGGCGCCAAGGATCCCCATAATCCTCTTGATGGACGTGTTGTTAAGTACCAGCCTTCGATTAATGAGGCTGCAAAAACATTATTTAACCAGATGTTGCAAATGAACAATTCTGCAAGGATGGATTCATCCATTAAGAACCATGATGCATTCCTTATTGACGATGTTCCTTCAGCCATTCCATTAGATAGCAGTAGTTCGTCCTCCCAAGTTTCTGGTGTAACACTTTCTGAGGTTCCACCTATTTCTGGGCAGTCCTTTATGCCAGTAGAATCTCAATTTCCTGTAAGTTGTATGACCAACAGCATTTCTGAGGTACAATCTTCACCTGCTGTGTTAACCGACTGTGTCAAAGCCGCTGAGTTTCCTGAATTTACAGCACATAACTGCCAAGACAATGTTTTGGATTTTGGTAAAATTCAAGGGGTGGCTACAGAAAGCAGCTTCATGAATCCTGATCAAAATTTGGGGGGGTCTGTCAGTGAGAATGACGATGAGTTGGATGTGATATCAGCTGTTTTGGATGGGACACAGTCTTTGGAAGCTGATGTTTTTTCTTCTGATGCGAATGAAATTTCTAAGCTTCCGGGAATCAATGATGAATTCTGGGAACATTTTTTTAGGCCAAGCCCACTTACTGGAGACACGGACGAACGTAAAGGTAGCTCTCTAGGATATGTTTTGACTAAGGATCAGGAATTGTCATTAGCAAAGGAGATTCAACAAGAAAAGATGGAGAAGAAACAACACATGGACTATCTTACTCAACAGATGGAACTTCTTGCATCGGACTCATCATTGTGTATATAA 1485 0.4229 MTAGIANYVLPPFLSKTYDMVDDSSTDSIVSWGKNNNTFVVFNSTDFSKFILPKYFKHNNFSSFVRQLNTYGFRKVDPDRWEFAHEGFLRGQKQLLKTITRRKSTHANGNNQQSSKALNPPVGSCVEVGKFGLDEEVERLKRDKNVLMQELVKLRQQQQSTDNQLLNVGQRVQGMEQRQQQMMSFLAKAMNSPGFMAQFSQQQSESNRHVTAGKKRRLQRQEEDSLGAKDPHNPLDGRVVKYQPSINEAAKTLFNQMLQMNNSARMDSSIKNHDAFLIDDVPSAIPLDSSSSSSQVSGVTLSEVPPISGQSFMPVESQFPVSCMTNSISEVQSSPAVLTDCVKAAEFPEFTAHNCQDNVLDFGKIQGVATESSFMNPDQNLGGSVSENDDELDVISAVLDGTQSLEADVFSSDANEISKLPGINDEFWEHFFRPSPLTGDTDERKGSSLGYVLTKDQELSLAKEIQQEKMEKKQHMDYLTQQMELLASDSSLCI* 495
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mal7g2956 494 Pfam HSF-type DNA-binding 13 102 IPR000232 GO:0003700|GO:0006355|GO:0043565
Mal7g2956 494 ProSitePatterns HSF-type DNA-binding domain signature. 52 76 IPR000232 GO:0003700|GO:0006355|GO:0043565
Mal7g2956 494 SUPERFAMILY "Winged helix" DNA-binding domain 10 102 IPR036390 -
Mal7g2956 494 MobiDBLite consensus disorder prediction 199 237 - -
Mal7g2956 494 MobiDBLite consensus disorder prediction 209 236 - -
Mal7g2956 494 PRINTS Heat shock factor (HSF) domain signature 13 36 IPR000232 GO:0003700|GO:0006355|GO:0043565
Mal7g2956 494 PRINTS Heat shock factor (HSF) domain signature 51 63 IPR000232 GO:0003700|GO:0006355|GO:0043565
Mal7g2956 494 PRINTS Heat shock factor (HSF) domain signature 64 76 IPR000232 GO:0003700|GO:0006355|GO:0043565
Mal7g2956 494 SMART hsfneu3 9 102 IPR000232 GO:0003700|GO:0006355|GO:0043565
Mal7g2956 494 PANTHER HEAT SHOCK TRANSCRIPTION FACTOR 5 464 IPR027725 -
Mal7g2956 494 PANTHER HEAT STRESS TRANSCRIPTION FACTOR A-1E-LIKE 5 464 - -
Mal7g2956 494 Coils Coil 462 482 - -
Mal7g2956 494 Coils Coil 130 157 - -
Mal7g2956 494 Gene3D - 6 103 IPR036388 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mal7g2956 Mal-Chr7 92744553 92747017 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mal7g2956 10 490 HSF AT5G16820 49.395 8.19e-139 407
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF HSF Mal7g2956 HSF_DNA-bind 2e-31 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mal7g2956 K09419 - gmx:100793665 545.043
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mal7g2956 7 92744553 92747017 Mal7g2956 7 92744553 92747017 ECH
Mal7g2956 7 92744553 92747017 Mal1g0779 1 9339997 9349168 PCT