Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mal7g2946 ATGGGAACGAGACCGCAGCAATCGTGTGTAGACGAAGAGGAGGAGGAGTTTCTAGGTTGTGGAACTACGATTTCGGGACAATCAGGCTCAACAAGCAGGAGTGCTGGATTGCCGTCTAGCCGGAGCGAGCAGACGATTGGAACAGCCACCGGTGATAACACTGCTCTTAGATTAAATAATCTTGATATACAAGATGATGATGCTGCTTCCCAAGGAGTAGTTGCTAGCAAGAAGAAAAAGAGAGGCCAGCAAAGGGCTGCTGGAGGTGATAAAAGTGGAAGAGGGCTTCGCCAATTTAGCATGAAAGTGTGTGAGAAGGTAGAAAGTAAAGGAAGAACAACTTACAATGAGGTGGCTGATGAGCTTGTGGCTGAATTTGCTGATCCAATCAATAGTGTTTTGTCCCCTGATAAGCAACAATATGACGAGAAAAACATTCGTCGAAGGGTCTATGATGCTCTGAATGTTCTCATGGCAATGGATATTATTTCTAAGGATAAAAAGGAAATACAATGGAAGGGTCTTCCTCGTACTAGTCTGAATGATATTGAAGAGCTAAAGACAGAGCGTCTTGGGCTCAGGAATAGAATTGAAAGGAAATCATCCTATCTGCAGGAGCTAGAGGATCAATTTGCAGGTCTTCAGAACCTTATTAAACGAAATGAACAATTATATAGCTCTGGAAATCCTCCCAGCGGAGGTGTATCTTTACCCTTTATTCTGGTACAGACGCGTCCTCATGCAACTGTTGAAGTGGAAATATCAGAAGACATGCAGCTTGTTCATTTTGATTTTAATAGTACTCCTTTTGAGTTGCATGACGACAATTATGTGCTCAAGGCAATGGAATTTGGTGATAGACCACAGAGTGATGTTGTTACACACAATGTTACAGATGGAGGGGAAGGTTCTAGCATGTCAGGCATGCATCAGTCACAGGTTCCTCCTTCAGCTTCAAGCGTGTCAACTAGGCCTCCAACATCTCCTCCACTCCCCGGAATATTAAAGGCAAGAGTCAAACAAGAGCATTGA 1032 0.436 MGTRPQQSCVDEEEEEFLGCGTTISGQSGSTSRSAGLPSSRSEQTIGTATGDNTALRLNNLDIQDDDAASQGVVASKKKKRGQQRAAGGDKSGRGLRQFSMKVCEKVESKGRTTYNEVADELVAEFADPINSVLSPDKQQYDEKNIRRRVYDALNVLMAMDIISKDKKEIQWKGLPRTSLNDIEELKTERLGLRNRIERKSSYLQELEDQFAGLQNLIKRNEQLYSSGNPPSGGVSLPFILVQTRPHATVEVEISEDMQLVHFDFNSTPFELHDDNYVLKAMEFGDRPQSDVVTHNVTDGGEGSSMSGMHQSQVPPSASSVSTRPPTSPPLPGILKARVKQEH* 344
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mal7g2946 343 Pfam Transcription factor DP 182 291 IPR014889 -
Mal7g2946 343 Coils Coil 197 224 - -
Mal7g2946 343 Gene3D - 86 179 IPR036388 -
Mal7g2946 343 MobiDBLite consensus disorder prediction 21 53 - -
Mal7g2946 343 Pfam E2F/DP family winged-helix DNA-binding domain 94 174 IPR003316 GO:0005667|GO:0006355
Mal7g2946 343 SUPERFAMILY "Winged helix" DNA-binding domain 94 175 IPR036390 -
Mal7g2946 343 PANTHER TRANSCRIPTION FACTOR DP 22 343 - -
Mal7g2946 343 MobiDBLite consensus disorder prediction 290 343 - -
Mal7g2946 343 MobiDBLite consensus disorder prediction 69 94 - -
Mal7g2946 343 PIRSF Txn_factor_DP 3 343 IPR015648 GO:0005667|GO:0051726
Mal7g2946 343 SMART DP_2 181 341 IPR014889 -
Mal7g2946 343 MobiDBLite consensus disorder prediction 1 53 - -
Mal7g2946 343 MobiDBLite consensus disorder prediction 291 321 - -
Mal7g2946 343 PANTHER TRANSCRIPTION FACTOR DP 22 343 IPR015648 GO:0005667|GO:0051726
Mal7g2946 343 CDD DP_DD 179 282 IPR014889 -
Mal7g2946 343 SUPERFAMILY E2F-DP heterodimerization region 180 294 IPR037241 -
Mal7g2946 343 SMART E2F_TDP_2 91 174 IPR003316 GO:0005667|GO:0006355
Mal7g2946 343 Gene3D Transcription factor DP 180 312 IPR038168 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mal7g2946 Mal-Chr7 92555882 92559709 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mal7g2946 63 292 E2F-DP Transcription Factor Family AT5G02470 50.649 1.84e-78 240
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF E2F-DP Mal7g2946 DP 2.6e-39 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mal7g2946 K04683 - qsu:112000390 525.783