Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mal7g2945 ATGGGAACGCAGCCGCAGAAATCGTGTGTAGACGAAGAGGATGAGGAATTGATGGGTTGTGGAACTACAATTTCGGGCCAATCAGGCTCGACTAGCAGGAGTGCCGGCGGGTTGCAGTCTAGCCGGAGTGAGCAGACGATGGGGACTCCGGCCGGTGATAACGCTGCTCTCAAATTGAACCATCTTGATATACAGGATGATGATGCTGCATCCCAGGCAGTAGTTGCCAAGAAGAAAAAGCGACGGGCTGTTGGGGGTGATAAGAATGGAAGAGGGCTCCGGCAATTTAGCATGAAAGTGTGTGAGAAGGTAGAAAGTAAAGGAAGAACAACTTACAATGAGGTGGCAGATGAACTTGTGGCTGAATTTTCTGATCCAAGCAATGGTGGTTTGTCCCCTGATCAGCAACAATATGATGAGAAAAACATCCGTCGAAGGGTCTACGATGCTCTGAATGTTCTCATGGCTATGGATATTATTTCCAAGGATAAAAAGGAAATACAATGGAAGGGTCTTCCTCGTACCAGTCTGAGTGATATTGAAGAACTTAAGACAGAGCGCCTTGGGCTCAGGAATAGAATTGAAAGGAAAGCAGCCTATCTGCAGGAGCTTGAGCAGCAATTTGTAGGTCTTCAGAACCTTATTCAACGAAATGAACAATTATGTAGCTCAGGAAATCCTCCCAGTGGAGGTGTATCTTTACCTTTTATTCTGGTACAGACACGTCCTCATGCAACTGTTGAAGTGGAAATATCAGAAGACATGCAGCTTGTTCATTTTGATTTCAATAGTTCTCCTTTTGAGCTGCATGACGACAATTATGTTCTCAAGGCAATGGATTTTTGTGGGAGTGAGAGACCACAGAGTGACATTGTTACACACAATATTGCGGATGGAGGGGAAGGTTCTAGCATGTCAGGTATGTATCAGTCACAGGTTCCTCCGTCAGTTTCAAACATGTCAGTTAGGCCTCCCACATCACCTCCACTCCCTGGAATATTGAAGGCAAGAGTTAAGCAAGAGCACTGA 1029 0.4558 MGTQPQKSCVDEEDEELMGCGTTISGQSGSTSRSAGGLQSSRSEQTMGTPAGDNAALKLNHLDIQDDDAASQAVVAKKKKRRAVGGDKNGRGLRQFSMKVCEKVESKGRTTYNEVADELVAEFSDPSNGGLSPDQQQYDEKNIRRRVYDALNVLMAMDIISKDKKEIQWKGLPRTSLSDIEELKTERLGLRNRIERKAAYLQELEQQFVGLQNLIQRNEQLCSSGNPPSGGVSLPFILVQTRPHATVEVEISEDMQLVHFDFNSSPFELHDDNYVLKAMDFCGSERPQSDIVTHNIADGGEGSSMSGMYQSQVPPSVSNMSVRPPTSPPLPGILKARVKQEH* 343
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mal7g2945 342 MobiDBLite consensus disorder prediction 21 50 - -
Mal7g2945 342 Pfam Transcription factor DP 179 284 IPR014889 -
Mal7g2945 342 Gene3D Transcription factor DP 177 298 IPR038168 -
Mal7g2945 342 PANTHER TRANSCRIPTION FACTOR DP 18 342 - -
Mal7g2945 342 SUPERFAMILY E2F-DP heterodimerization region 178 283 IPR037241 -
Mal7g2945 342 PANTHER TRANSCRIPTION FACTOR DP 18 342 IPR015648 GO:0005667|GO:0051726
Mal7g2945 342 SMART E2F_TDP_2 88 171 IPR003316 GO:0005667|GO:0006355
Mal7g2945 342 Pfam E2F/DP family winged-helix DNA-binding domain 91 171 IPR003316 GO:0005667|GO:0006355
Mal7g2945 342 MobiDBLite consensus disorder prediction 293 342 - -
Mal7g2945 342 CDD DP_DD 176 279 IPR014889 -
Mal7g2945 342 Gene3D - 81 176 IPR036388 -
Mal7g2945 342 SUPERFAMILY "Winged helix" DNA-binding domain 91 172 IPR036390 -
Mal7g2945 342 SMART DP_2 178 340 IPR014889 -
Mal7g2945 342 MobiDBLite consensus disorder prediction 1 54 - -
Mal7g2945 342 Coils Coil 187 221 - -
Mal7g2945 342 PIRSF Txn_factor_DP 4 342 IPR015648 GO:0005667|GO:0051726
Mal7g2945 342 MobiDBLite consensus disorder prediction 304 320 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mal7g2945 Mal-Chr7 92542923 92546399 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mal7g2945 64 279 E2F-DP Transcription Factor Family AT5G02470 52.074 1.64e-76 235
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF E2F-DP Mal7g2945 DP 4.9e-40 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mal7g2945 K04683 - jre:108988357 504.212