Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mal7g2937 ATGATGAGGCTGCAGACATACGCGAGTCTTAGTTTAATTGCCACTTTGGCTATTGCATATCATGCATTTAACAGTAGAGGCCAGTTTTATCCGGCAATGGTTTATTTGGCGACTTCTAAGATCAGTTTGGTGCTTCTTCTCAACATGGCTCTGGTCATCATGTGTGTTATGTGGCAGATAACTAAAAAGGTGTTTCTTGGTTCTCTTCGAGAAGCTGAGGTTGAAAGGCTTAATGAACAAGCATGGAGGGAGGTTATGGAAATCCTCTTTGCAATTACTATTTTTAGGCAGGATTTCTCTATTACATTCCTTGCCATGGTTACGGCACTCTTGTTAATTAAGGCTTTGCATTGGTTGGCTCAGAAGAGAGTCGAGTACATAGAGACTACACCTTCTGTGTCTGTGTTGTCTCAAGTTCGAATCGTATCTTTTTTGGGATTCCTTCTTCTTCTAGATGGCGCGTTTTTGTATAGTTCAGTGAAGCATTTACTAGCAACCAAGCAGGCTTCGGTTTCGATCTTCTTTTCTTTTGAGTACATGATACTAGCAACAACAACAGTATCAGTTTTTGTAAAATACATTTTCTATGTCAGTGACATGCTTATGGAAGGGCAATGGGAAAAGAAACCAGTCTTCACGTTTTACTTGGAACTTGTTAGGGACTTGCTTCACTTGTCCATGTATATGTGCTTCTTTCTGGCAATTTTCATAAACTATGGTGTTCCTTTGCACTTAATAAGGGAGCTGTACGAGACATTTAGGAACTTCAAAGTTCGTATTGCAGATTACCTACGTTATCGTAAGATCACTTCTAACATGAATGATCGGTTTCCAGATGCAACCCCTGAAGAGCTTAATTCAAATGACGTAACCTGCATCATCTGTCGTGAAGAGATGACTACTGCAAAGAAACTTATATGTGGTCATCTTTTTCATGTTCATTGCCTCCGATCATGGCTAGAGCGGCAGCATACTTGCCCTACCTGCAGAGCACTGGTTGTCCCATCAGAAAATGGGACAACTGCTGTTGGGGGACAACAAACACCACAGTCAGATGCTCATCGACAAGGGGCAGACACTGGAAGCTCAGCTCAAACTGAGGTTGGCAATGGGGTGACATGTGATAGTCTGAGTCGGCATCAAGCAAGACTTCAAGCAGCTGCTGCTGCAGCTTCAATATATGAGAAGTCTTATGTGTACCCTTCTCCAACTTTTGCATGCTCCCCTGGCTACACTCTTTATCCCCCGGTTCAAAGATCAGTGGTTCAATCATCTAATAATGTTGAGCTTGATGGAGAACAAGTTTCCAGTGAGCAAGCACAAAAGCAGTTTGTGATCCCTGGTGGACCAATGAATGCATCCTCTTCTCCAGTGCAAAGCTTCTATGTTCCACCATCTCAAACACATGCAGCCCACATGACTTATGGAGAGGGATCCCAGCTGGGAGCTCAAACAAAACTCCAGAACGAGAAAACAAATGTTGACAAAGGTGTAGGTGAGGACACATCATTATCAGATAGCAGAGGCAAACATGTTGCTGCTTCTTCATCTGTATCAAGTCATGATGAGAGTCAAGACAGCAAAGCATAA 1590 0.427 MMRLQTYASLSLIATLAIAYHAFNSRGQFYPAMVYLATSKISLVLLLNMALVIMCVMWQITKKVFLGSLREAEVERLNEQAWREVMEILFAITIFRQDFSITFLAMVTALLLIKALHWLAQKRVEYIETTPSVSVLSQVRIVSFLGFLLLLDGAFLYSSVKHLLATKQASVSIFFSFEYMILATTTVSVFVKYIFYVSDMLMEGQWEKKPVFTFYLELVRDLLHLSMYMCFFLAIFINYGVPLHLIRELYETFRNFKVRIADYLRYRKITSNMNDRFPDATPEELNSNDVTCIICREEMTTAKKLICGHLFHVHCLRSWLERQHTCPTCRALVVPSENGTTAVGGQQTPQSDAHRQGADTGSSAQTEVGNGVTCDSLSRHQARLQAAAAAASIYEKSYVYPSPTFACSPGYTLYPPVQRSVVQSSNNVELDGEQVSSEQAQKQFVIPGGPMNASSSPVQSFYVPPSQTHAAHMTYGEGSQLGAQTKLQNEKTNVDKGVGEDTSLSDSRGKHVAASSSVSSHDESQDSKA* 530
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mal7g2937 529 SUPERFAMILY RING/U-box 272 336 - -
Mal7g2937 529 Pfam Ring finger domain 291 330 IPR001841 -
Mal7g2937 529 PANTHER - 1 427 - -
Mal7g2937 529 ProSiteProfiles Zinc finger RING-type profile. 292 330 IPR001841 -
Mal7g2937 529 MobiDBLite consensus disorder prediction 478 529 - -
Mal7g2937 529 MobiDBLite consensus disorder prediction 478 492 - -
Mal7g2937 529 MobiDBLite consensus disorder prediction 493 507 - -
Mal7g2937 529 SMART ring_2 292 329 IPR001841 -
Mal7g2937 529 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 264 339 IPR013083 -
Mal7g2937 529 CDD RING-H2_synoviolin 289 330 - -
Mal7g2937 529 MobiDBLite consensus disorder prediction 508 522 - -
Mal7g2937 529 PANTHER RING ZINC FINGER PROTEIN 1 427 - -
Mal7g2937 529 MobiDBLite consensus disorder prediction 340 371 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mal7g2937 Mal-Chr7 92419013 92424171 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mal7g2937 1 410 C3H Transcription Factor Family AT3G16090 74.880 0.0 644
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mal7g2937 K10601 - gmx:100816441 744.191
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mal7g2937 7 92419013 92424171 Mal7g2937 7 92419013 92424171 ECH