Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mal7g2877 ATGGAATTCATCGGAAAAACCGTTCAGAAATCGGTGGACGGTGGTGGAATTCTCACCGGAACTGTCAAATCTCACAATTCTTCGTCGGGTTTGTTGGAGATCGTTTTTGATGACGGTCATTGCGAGGAGATGGAAGTTTCTGAGGTGGTTTCGATGCTGGAAGTTCAATCGGAGGTGGTGAAACTCAAAGCTAGGGTTGGCCGGAAACCTAAAAAACGACGCCGTGTTGAGCAGAGGATTGAAACGATGACCGAATCGGCGGAGTTTTCAGGTAATGGTAGTGATGATAATTTGGTGGCGGGTAGTGAAATTAGCGGGATTTTGAATGGTGATGATGATTCTAGTGGCGGGAATGTTGTGGGAAATGGGAATGGGAGTAGTGGGAGTGATGAAAAAGTAGCTAGTGAAAATGGGTTTGGTTTTGAAGAGATTTCAAATTTGAATGGGGGTGTTTCTGATAAAAATGATAATGAAATTTGTGTTGAAGATGGTGTCGATTTGAATGCTAGGGTTAATATGAATGATAATGGAATTTGTGTTAAAGATGGTGTTGATTTGAATGCTAGGGTTAATTTGAATGAGAATGAGGGTGTTTCTGATAATAATGATAATGGGATTTGTGTTCAAGATGACATTGATTTGAATGCTAAGGTTAATTTGAATGAGGATATTAATTTGAATGATGTGTGTGATTTGACTTTTAATAATGAGGGTGATTTGGAGAGAAGAGATTGTATTGATTTGAATTTGGATGTGAATGTAGAGGAGGGTGTGAATTTGGATGCAAATTTGGGAGGGGAAATGTTGCGGCGGGAATGTGAATTTGATTTGAATGTGGGGGTGTGTGAAGAAGTTAAGGAAGTTCAGGGTTGTGCTGAAGGGAATGAACATTTTGAGGTAGATGGTGTGACAGGTCAGCTGCGAGAAGATGGGTTAGATGTTGAGCATAGGTCTATGGAAGTTGATGGTGTTCGTAGTGATTTGGATTGTGTCTCTGATGCTATCAAATCGGAGGACTTTCGTGTTTCGGTTGAGAATATAACTGAAGATGCTTCTTTGTGTTTGGTTGAGAAAAAGGAATGTCATGATGGCAAAGAAAATGTGGCGGCTATTTACTCTCCTATGGTTCCGGATGGTATTTCTGTTAGGGATTGTGATTATGTTTCCTTGGAAACTGGTGTTGCCGTAGTTAATGAATGCCAAGATGATCCAGGAAGTCAATGCACACAAGGACGTAGTCAGAGGAAGAGAAGAAAAGTGTCGGATAATCTAAAAGCCACCCCGGACACAGCTTTGAGGAGGAGTTCTCGCCGGGTGTCAGCTAGAAAACAGGATTCAAGTGCAGTATCAGGGCAGGTGACTGATGATCCTTTGTCATCCTTGGAAACCAGTGTGACAGAAGAAAAACCTTCAATGCCTGGAAATGAGAAATATGAACAGTGCAATGTTCCTATTCCGAAGCTGCAATTACCCCCTTCTTCTCAAAATTTGCGTTTAGATGACATTCCTGTTCTTGAATTTTTTTCTGTCTATGCTTATTTAAGATCATTCAGCACCTTGTTATTTTTGAGTCCATTTGAGTTGGAAGATCTTGTAGCTGCACTTAAGTCTGAAATCTCTAGTGTATTATTTGACAACATTCATGTTTCTATTTTGCAAACTCTGAGAAAGCATTTGGAATTCCTTTCCAATGAGGGTTGCCAATCTGCATCCATTTGCCTGAGGAATCTTAACTGGGATTTCTTGGACCTTGTCACATGGCCCATGTTCATGGCTGAGTACCTTCTGATTCACAGTTCAGAATTTAAAACTAGTTTTGATGCTAACCACTCAATGTTCGGAACTGACTACTACAAACAACCTGTCAATTTGAAGCTTGAGATTCTTCAGTACCTCTGTGACGATATGATTGAATCAGACACTATAAGGGCAGAGATGAACAGAAGATCTTTGGTAGCAGAGACTGGTATGGGTTTTGATCAGAATATTTATTTTGACACTGGCAAGAAAAAAAGAGCTGCAATGGATGTCTCTGGTGGCTCTTGCTTGACTGAGGAGATTGTGGATGACACAACTGACTTGAACAGTGATGAATGTTGCCTTTGCAAGATGGATGGAAATTTAATATGTTGTGATGGTTGCCCTGCTGCATTCCACTCAAGGTGTGTCGGGCTTGCAACTGACAACCTTCCTGAAGGTGACTGGTATTGCCCTGAGTGTGCTATTGGCACACACCGGGCTTCGATGAAATCACGAAGATCACTTCGAGGAGCAGATTTTTTGGGGACGGATCCTCACGGCTGTCTTTATTTTGATAGCTGTGGTTACCTGTTGGTTTCAAACTCATCAGATGCGGGTTCCTTGTTCAATTACTACCATAGAAATGATATACATGTTGTAATTGAAGTTCTAAAGTCTATGGATACTTTATATGGAGACATATTAATGACTATCTGCAAGCATTGGGATCTTCCGTCTGACTTAAATGCAGTGGCTAGTAATTTGGCAGTCTTTAATCGAAGTTCCTGTAAGAACATGCAAATGACGGCTGAATATTATGCTACGCCTACATCTTTACCACCTTTTACTTCTTCAGAAACATGTATGGACAAGAATCTGGTTGATGATCAGAAAAAGTTGGAGAAAATTTCAACTATTGACTATTGTATTCAAGATGGCCAAGACTTTCCAAAAGCTGGGAACCAATTAGACCCAACAATAGAAAGTCCTGGTATTGCCTCAAAAGGATCAGCTGATACCGCACAATTGAGATCAGGCATCGAGAGTATTCAGATGCACAGGCTATATGATTCCAATAGATCCATAGCTGTTAGCAGTACCCCTGGAAATAATGATACATCACAAGCATCTTGTGGGACCAACTACATAAACTATTACAGCCTTGCCAGGGTGCCCTCATTAGTTGCGCAGGAATTGATGTCTAAGTCACCTGAAAAGATCAATAAAAATATTGTAATGACTGAAGAAGAAATAATTTCAGACCAATCAAAGTGCATCATGAAGAAGTCCACCAACTTTTGTTGGCCAAGTATTCAAAACCTGAATGCAGCTGCCCTAAAGGAAAAATGTGGGTGGTGCTTTTCTTGCAAGGTTGCAAATGATGACAGAGATTGCTTGTACATTTCTGTAGTGAAACCTCTTTATGAAGTGTCTAATAGTACTTCAGTTGAGCTTCAACCCAGCAAGATCCAGAATGGACATCTTAGAGAGATAATATGTTATATTTTCTCTCTTGAGGTTCAACTGCGGGGTCTTTTATTGGGTCCATGGTTAAATCTGCATCAAACAAATCTTTGGCATAAGGATCTTTTGCAGACATCTGATTTTCTTTCCGTTAAACGATTATTGCTTCTTTTGGAATCCAATTTGAGTCATCGTGCACTTTCAGCCGATTGGTTAAAGCATGTGGATTCTGTGGTTACTATGGGATCAGCTACTCATATTGTGGTCAGTGTAGCACGAACATCCTCAAAGCATGGTATTGGAAGGAAAAGGGCCAGGCATTCAGATATTGAATCCAGTTCATCTTCAAAGAGTACTGGTGGTTTGGTAATGTATTGGTCAAGAGGTGGTAGGCTTTCCCGAAAGTTGTTTAATTGGAAGGTCCTGCCTCGCTCTTTCGTTACCAAGGCTGCTAGACAAGCTGGGACTACAAAGATACCGGGTATTTTATATCCTGAAAATTCAGACTTTGCAAAGAGAAGCAGATGTGTTGCCTGGCGAGCTGCTGTTGAGATGTCAACTACTGTTGAGCAGCTGGCTTTACAGGTTAGAGAACTCTATTCAAACATAAGGTGGCATGATATTGCGAATAGCCATCCTCTATATGTATTGGACAAGGAATCTAGAAAATCAGTCAGGCTATTCAAAAAAGCAATTGTACGCAGGAAGTGCACGGATGGACAATCTGTGAAATACCTTCTTGATTTTGGGAAGAGAAGGTGTATTCCAGATATTATTATTAAACATGGTTCTTTGTTGGAGCAACCTTCAAGTGAGAGGAAAACATATTGGCTGAACGAATCTTATGTTCCTTTGCATCTTGTAAAGAATTTTGAAGAAAAAAGAATCGTCCGCAAGTCCAATGATAAGAAACATGGAAAAATTCTTGAGATTGGTAGAGTAAAGAGGGCTCCTCAACAAAGGGGTTTTTCATATTTGTTTTCTAGATTGGAAAGATCTGAATGCCATCAGTGTGGGCATTGCAACAAAGATGTTCCAATCAGGGAAGCTGTGAGTTGCATTTATTGCAAAGGATATTTCCACAAGAGGCATGCCAGGAAATCTGGTGGCACAGGAGCTACTGAATGCACATATTCATGTCACAAATGCCAGGACGGGTTGCATGTAAAGACTAATACTAATAGAAGGAATGTTGGCTCAAAACGGCAGAAGATTCAGTCACAGAATGGTAAAAGTACCCCTTTGGTTGGTAAATCAGTGAACCTTAAAGGCAATAAAAAGGCATCAAGTAAGGTGCAGCAGGTGATATCTCGAAACAGTAAGAAGATCCCATCAATTGTACCTCTTCGTCGTTCTACTAGGAAGGCCAAATCCTTATATCTGCACACTCAAAAGATTGGAGGGCGTAAAAAAGGAAAGCAAAGTAAAAAGAGTGTAGGGCGTAAAAAAGGAAAGCAAAGTAAATCCAAGAAGGTGACGTCTCAACAGTCCACGGAAACTACTGGTCAACGTAAAAAGTTGGCAGTAACTGCGGCATGTAAGAAAAGAACAAAACTTTTTAACTGTTACTGGCTTAATGGTCTTCGGTTTTCTCAAATGCCAAATGATGAACGCGTATTGCTTTTTAAAGAGAAAAGGCATATTATGTCCAATGTATCTACTGGCTCATTTGATTATCCTGAATGCCGCCTTTGCTGTGGAGATGGATCTACTTCAAATTATATTGGTTGTGAAATCTGTGGAGATTGGTTTCATGGCGATGCTTTTGGCCTCACTGTAGAGAATGCCAGACAACTTATTGGGTTTAGATGCCATGTTTGTCGTGGTAGGGATGCTCCGATCTGTCCCCATGTAAAGATTGATGATTTGTCTCCTACTGAACCCAATGCTGCAACTGAATGTGCGGAGGAATGA 5118 0.406 MEFIGKTVQKSVDGGGILTGTVKSHNSSSGLLEIVFDDGHCEEMEVSEVVSMLEVQSEVVKLKARVGRKPKKRRRVEQRIETMTESAEFSGNGSDDNLVAGSEISGILNGDDDSSGGNVVGNGNGSSGSDEKVASENGFGFEEISNLNGGVSDKNDNEICVEDGVDLNARVNMNDNGICVKDGVDLNARVNLNENEGVSDNNDNGICVQDDIDLNAKVNLNEDINLNDVCDLTFNNEGDLERRDCIDLNLDVNVEEGVNLDANLGGEMLRRECEFDLNVGVCEEVKEVQGCAEGNEHFEVDGVTGQLREDGLDVEHRSMEVDGVRSDLDCVSDAIKSEDFRVSVENITEDASLCLVEKKECHDGKENVAAIYSPMVPDGISVRDCDYVSLETGVAVVNECQDDPGSQCTQGRSQRKRRKVSDNLKATPDTALRRSSRRVSARKQDSSAVSGQVTDDPLSSLETSVTEEKPSMPGNEKYEQCNVPIPKLQLPPSSQNLRLDDIPVLEFFSVYAYLRSFSTLLFLSPFELEDLVAALKSEISSVLFDNIHVSILQTLRKHLEFLSNEGCQSASICLRNLNWDFLDLVTWPMFMAEYLLIHSSEFKTSFDANHSMFGTDYYKQPVNLKLEILQYLCDDMIESDTIRAEMNRRSLVAETGMGFDQNIYFDTGKKKRAAMDVSGGSCLTEEIVDDTTDLNSDECCLCKMDGNLICCDGCPAAFHSRCVGLATDNLPEGDWYCPECAIGTHRASMKSRRSLRGADFLGTDPHGCLYFDSCGYLLVSNSSDAGSLFNYYHRNDIHVVIEVLKSMDTLYGDILMTICKHWDLPSDLNAVASNLAVFNRSSCKNMQMTAEYYATPTSLPPFTSSETCMDKNLVDDQKKLEKISTIDYCIQDGQDFPKAGNQLDPTIESPGIASKGSADTAQLRSGIESIQMHRLYDSNRSIAVSSTPGNNDTSQASCGTNYINYYSLARVPSLVAQELMSKSPEKINKNIVMTEEEIISDQSKCIMKKSTNFCWPSIQNLNAAALKEKCGWCFSCKVANDDRDCLYISVVKPLYEVSNSTSVELQPSKIQNGHLREIICYIFSLEVQLRGLLLGPWLNLHQTNLWHKDLLQTSDFLSVKRLLLLLESNLSHRALSADWLKHVDSVVTMGSATHIVVSVARTSSKHGIGRKRARHSDIESSSSSKSTGGLVMYWSRGGRLSRKLFNWKVLPRSFVTKAARQAGTTKIPGILYPENSDFAKRSRCVAWRAAVEMSTTVEQLALQVRELYSNIRWHDIANSHPLYVLDKESRKSVRLFKKAIVRRKCTDGQSVKYLLDFGKRRCIPDIIIKHGSLLEQPSSERKTYWLNESYVPLHLVKNFEEKRIVRKSNDKKHGKILEIGRVKRAPQQRGFSYLFSRLERSECHQCGHCNKDVPIREAVSCIYCKGYFHKRHARKSGGTGATECTYSCHKCQDGLHVKTNTNRRNVGSKRQKIQSQNGKSTPLVGKSVNLKGNKKASSKVQQVISRNSKKIPSIVPLRRSTRKAKSLYLHTQKIGGRKKGKQSKKSVGRKKGKQSKSKKVTSQQSTETTGQRKKLAVTAACKKRTKLFNCYWLNGLRFSQMPNDERVLLFKEKRHIMSNVSTGSFDYPECRLCCGDGSTSNYIGCEICGDWFHGDAFGLTVENARQLIGFRCHVCRGRDAPICPHVKIDDLSPTEPNAATECAEE* 1706
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mal7g2877 1705 Pfam DDT domain 505 557 IPR018501 -
Mal7g2877 1705 ProSiteProfiles DDT domain profile. 501 561 IPR018501 -
Mal7g2877 1705 Pfam PHD-finger 699 741 IPR019787 -
Mal7g2877 1705 PANTHER PHD FINGER FAMILY PROTEIN 1 1690 - -
Mal7g2877 1705 MobiDBLite consensus disorder prediction 442 470 - -
Mal7g2877 1705 SUPERFAMILY FYVE/PHD zinc finger 1626 1678 IPR011011 -
Mal7g2877 1705 ProSiteProfiles Zinc finger PHD-type profile. 696 743 IPR019787 -
Mal7g2877 1705 MobiDBLite consensus disorder prediction 83 99 - -
Mal7g2877 1705 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 1624 1682 IPR013083 -
Mal7g2877 1705 SMART PHD_3 1405 1452 IPR001965 -
Mal7g2877 1705 SMART PHD_3 698 741 IPR001965 -
Mal7g2877 1705 SMART PHD_3 1629 1676 IPR001965 -
Mal7g2877 1705 MobiDBLite consensus disorder prediction 402 476 - -
Mal7g2877 1705 ProSitePatterns Zinc finger PHD-type signature. 699 740 IPR019786 -
Mal7g2877 1705 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 686 762 IPR013083 -
Mal7g2877 1705 SUPERFAMILY FYVE/PHD zinc finger 683 742 IPR011011 -
Mal7g2877 1705 PANTHER PHD-FINGER AND DNA BINDING DOMAIN-CONTAINING PROTEIN 1 1690 - -
Mal7g2877 1705 CDD PHD2_CHD_II 699 740 - -
Mal7g2877 1705 MobiDBLite consensus disorder prediction 1463 1569 - -
Mal7g2877 1705 MobiDBLite consensus disorder prediction 80 134 - -
Mal7g2877 1705 SMART testlast3 501 561 IPR018501 -
Mal7g2877 1705 MobiDBLite consensus disorder prediction 108 133 - -
Mal7g2877 1705 MobiDBLite consensus disorder prediction 1463 1509 - -
Mal7g2877 1705 MobiDBLite consensus disorder prediction 1532 1557 - -
Mal7g2877 1705 Pfam WSTF, HB1, Itc1p, MBD9 motif 1 615 647 IPR028942 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mal7g2877 Mal-Chr7 91423786 91436901 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mal7g2877 1 1699 PHD Transcription Factor Family AT5G12400 39.691 0.0 1065
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR DDT Mal7g2877 DDT 1.4e-10 No_clan
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mal7g2877 7 91423786 91436901 Mal7g2877 7 91423786 91436901 ECH