Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mal7g2855 ATGGAAGCTTTGTTCCTTACCAAACCAATTTCTCACTTCAAACCCAAACACTCTCTAACTCCCAAACACCCATTTGAATTTCTCTCCCACCACCACCAATCTCTCCCCCTCCGCCACCAACCCACCAAACTCCCCACTGTCACCGCCGCAACTCAAAACCAACAACAAGAACAAACCACCCCCAAAACTATCGAAGATGAAGAATCCTACGGCGAAGTCAAGAAAATCATCGGAAGCAAAGCCTTGGAAGATTCAACCGGCATGGAGTATCTCATCGAATGGAAAGATGGCCATGAACCTTCCTGGGTTCCCGCCGACTTCATAGCTAAAGACGTTGTCGCTGAATACGAAACTCCTTGGTGGACCGCCGCTAGAAAATCCGATGAAAATGCCCTCAAGACAATCCTCGAAGCCGAGGATTATCGCGATGTAAACGCCGTGGACGGCGACGGTAGAACCGCACTCCTTTTTGTCGCTGGCCTCGGCTCAGAGCCATGCGTTAAGCTCTTAGCTGAAGCCGGCGCAAATTTAGACCACCGCGATAATTGCGGTGGTCTATCCGCGCTGCATATGGCAGCTGGATATGTAAGACCTGGAGTAGCAAACCTGCTACTCCAGCTCGGCGCTGATCCTGAGATCAGCGACGATCGTGGGAGAACAGCGTTGGATTTAGCGAGGGAGTTATTAAAATCGACCCCGAAGGGGAATCCAATGCAATTTGGAAGAAGAATGGGGTTAGAGGGTGTGGTTAGGGTTTTGGAGGGTGCAGTGTTTGAATATGCTGAAGTGGAGGAGATTATGGAGAAGAGAGGGAAGGGTGAGAATTTGGAGTATTTGGTGAAATGGAAAGATGAAAGTGCTAATGAGTGGGTGAAGGCGAGGTATGTGGCGGAGGATTTGGTGAGGGATTATGAAGCTGGGCTTGAATATGCGGTGGCGGAAGCGGTGGTTGGTCGGAGAGTTGGGGATGATGGGAAGTATGAGTTTTTGGTGAAATGGGTTGATTTAGATGAGCCAACTTGGGAGCCTGTGGAGAATGTTGATTCTGAGCTTGTTAAGGTGTTTGAATTGAGTAATAATCAAGCCCAGCCCAGTCTTGATAGTCTTGATAATGGGCTTTCTACGGTTGGTTTGAGTCAGGATGGGCCAACAAGTGTTAGTGCATGA 1167 0.491 MEALFLTKPISHFKPKHSLTPKHPFEFLSHHHQSLPLRHQPTKLPTVTAATQNQQQEQTTPKTIEDEESYGEVKKIIGSKALEDSTGMEYLIEWKDGHEPSWVPADFIAKDVVAEYETPWWTAARKSDENALKTILEAEDYRDVNAVDGDGRTALLFVAGLGSEPCVKLLAEAGANLDHRDNCGGLSALHMAAGYVRPGVANLLLQLGADPEISDDRGRTALDLARELLKSTPKGNPMQFGRRMGLEGVVRVLEGAVFEYAEVEEIMEKRGKGENLEYLVKWKDESANEWVKARYVAEDLVRDYEAGLEYAVAEAVVGRRVGDDGKYEFLVKWVDLDEPTWEPVENVDSELVKVFELSNNQAQPSLDSLDNGLSTVGLSQDGPTSVSA* 389
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mal7g2855 388 Gene3D - 307 357 - -
Mal7g2855 388 ProSiteProfiles Chromo and chromo shadow domain profile. 311 347 IPR000953 -
Mal7g2855 388 ProSiteProfiles Chromo and chromo shadow domain profile. 261 290 IPR000953 -
Mal7g2855 388 SUPERFAMILY Chromo domain-like 259 307 IPR016197 -
Mal7g2855 388 MobiDBLite consensus disorder prediction 47 68 - -
Mal7g2855 388 SUPERFAMILY Ankyrin repeat 115 227 IPR036770 -
Mal7g2855 388 SUPERFAMILY Chromo domain-like 313 356 IPR016197 -
Mal7g2855 388 SUPERFAMILY Chromo domain-like 66 120 IPR016197 -
Mal7g2855 388 ProSiteProfiles Ankyrin repeat region circular profile. 150 182 - -
Mal7g2855 388 PANTHER HOMEOBOX PROTEIN WARIAI 1 361 - -
Mal7g2855 388 ProSiteProfiles Ankyrin repeat profile. 150 182 IPR002110 GO:0005515
Mal7g2855 388 ProSiteProfiles Ankyrin repeat region circular profile. 184 216 - -
Mal7g2855 388 SMART ANK_2a 115 146 IPR002110 GO:0005515
Mal7g2855 388 SMART ANK_2a 184 213 IPR002110 GO:0005515
Mal7g2855 388 SMART ANK_2a 150 179 IPR002110 GO:0005515
Mal7g2855 388 Pfam Chromo (CHRromatin Organisation MOdifier) domain 313 355 IPR023780 -
Mal7g2855 388 MobiDBLite consensus disorder prediction 366 388 - -
Mal7g2855 388 Gene3D - 115 256 IPR036770 -
Mal7g2855 388 SMART chromo_7 310 360 IPR000953 -
Mal7g2855 388 SMART chromo_7 69 121 IPR000953 -
Mal7g2855 388 SMART chromo_7 259 309 IPR000953 -
Mal7g2855 388 Gene3D - 257 306 - -
Mal7g2855 388 Gene3D - 67 114 - -
Mal7g2855 388 Pfam Ankyrin repeats (many copies) 170 225 IPR002110 GO:0005515
Mal7g2855 388 ProSiteProfiles Ankyrin repeat profile. 184 216 IPR002110 GO:0005515
Mal7g2855 388 CDD CD3_cpSRP43_like 308 357 - -
Mal7g2855 388 PANTHER SIGNAL RECOGNITION PARTICLE 43 KDA PROTEIN, CHLOROPLASTIC 1 361 IPR030300 GO:0009416|GO:0009507|GO:0045038|GO:0080085
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mal7g2855 145 225 CAMTA Transcription Factor Family AT5G09410 41.573 2.74e-07 50.8
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mal7g2855 K12271 - gmx:100818382 535.028
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mal7g2855 7 91058753 91059919 Mal7g2855 7 91058753 91059919 ECH