Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mal7g2836 ATGGAAATTACACCAGCTAGAAAGACACAGAAGGCTGACCGAGAAAAGTTAAGGAGGGATCGACTCAATGAACAGTTTGTAGAACTGGGAAACATTTTAGACCCCGACAGGCCCAAAAATGATAAAGCAACTATTATAGGGGATACAGTTCAATTGCTGAAGGACCTTACTTCTCAAGTCAGTAAACTAAAAGACGAATATACTATGTTAAATGAAGAATCTCGTGAGTTGTCTCAGGAGAAAAATGATCTCAGAGAAGAAAAGGCTTCTCTTAAATCAGATATTGAGAATTTGAATAACCAGTATCAGCTGCAACTAAGGACTATGTATCCATGGCCTGCAATGGATCATTCCGTTATGATGGCTCCACCATCATATCCGTATCCAGTTCCAATGCCGGTACCTGCTGGTTCAATTCCCATGCAGCCGTACCCCTACTATGCTAATCAACATCCTGCAGTCATCCCTAACCCATGTTCAACATATGTTCCTTTTTTAGCCCCGAACACAATTGTTGAACAACAATCCACTCAGTACGTATACCCGCCTCTTCATCCAGGTAGCCGGTCCCAAGTATCAGGAAAACAAGACTCCAAAAACAAATCATCCAGGGAGAGCAAGGCTCAAAGAAATGAGGATTCTAATGATGTAGCCACGGACCTTGAGTTGAAGACTCCTGGGTCTTCCGCAGATCAGGATTTATCATCCGTGCAAAAAAAATCTAGTAAGTCGTCTAGGAAGGAAAACAGTTTCACAGATGGTAGTTCGTTAGGCAAGTGTTCTTCATCTCACAGTGTTCAGGATAGCTCATCAAGTAGTGTAGTTGGGAGCAGAAAGGCTACTGAATGA 849 0.424 MEITPARKTQKADREKLRRDRLNEQFVELGNILDPDRPKNDKATIIGDTVQLLKDLTSQVSKLKDEYTMLNEESRELSQEKNDLREEKASLKSDIENLNNQYQLQLRTMYPWPAMDHSVMMAPPSYPYPVPMPVPAGSIPMQPYPYYANQHPAVIPNPCSTYVPFLAPNTIVEQQSTQYVYPPLHPGSRSQVSGKQDSKNKSSRESKAQRNEDSNDVATDLELKTPGSSADQDLSSVQKKSSKSSRKENSFTDGSSLGKCSSSHSVQDSSSSSVVGSRKATE* 283
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mal7g2836 282 Pfam Helix-loop-helix DNA-binding domain 7 56 IPR011598 GO:0046983
Mal7g2836 282 SUPERFAMILY HLH, helix-loop-helix DNA-binding domain 5 76 IPR036638 GO:0046983
Mal7g2836 282 PANTHER TRANSCRIPTION FACTOR BHLH121 3 280 IPR044579 GO:0003700|GO:0055072
Mal7g2836 282 MobiDBLite consensus disorder prediction 221 239 - -
Mal7g2836 282 Coils Coil 53 108 - -
Mal7g2836 282 MobiDBLite consensus disorder prediction 198 219 - -
Mal7g2836 282 PANTHER TRANSCRIPTION FACTOR BHLH121 3 280 - -
Mal7g2836 282 SMART finulus 12 62 IPR011598 GO:0046983
Mal7g2836 282 MobiDBLite consensus disorder prediction 180 197 - -
Mal7g2836 282 ProSiteProfiles Myc-type, basic helix-loop-helix (bHLH) domain profile. 6 56 IPR011598 GO:0046983
Mal7g2836 282 MobiDBLite consensus disorder prediction 248 282 - -
Mal7g2836 282 Gene3D - 6 89 IPR036638 GO:0046983
Mal7g2836 282 CDD bHLH_AtILR3_like 11 85 - -
Mal7g2836 282 MobiDBLite consensus disorder prediction 180 282 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mal7g2836 Mal-Chr7 90932541 90934408 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mal7g2836 6 246 Basic Helix-Loop-Helix Transcription Factor Gene Family AT3G19860 63.158 1.47e-96 285
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bHLH Mal7g2836 HLH 3.5e-08 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mal7g2836 - - cam:101491902 465.307
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mal7g2836 7 90932541 90934408 Mal7g2836 7 90932541 90934408 ECH