Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mal7g2829 ATGGCAAGGCCATTTGATTTCATCAATGATATCACAGACAAAACAGATTTTTGGAAACTTGCAGTCAAAGTGAAAGATAAGTGGAATGTAAGGGTTAAAGACAAAGAACATTATGAGATGGTCATTATAGATGCTAAGGTTGAAAATAAGACTTACACTTTAACTAATTTTCAAGTCTTGAAAAATGACATAATGTTCAAAGCATGTAATCATAAGTACAAATTAATATGGACTGGTGGAACAAGTATTGAAGAGGATACAAATCATCAGATTCCTGAAGTTGTCATCAAATTCAAACCATTTTCTGACATTGTGGCTGGGAAGTGGCAGCCCGATCTTTTAGTTGATGTCATTGGTGCTGTATTTGAAATGGGATACCAACAACTTGAGAAAGGCTCGAAACCGCTTCAAGTTAATTTCTTATTGACAGATTTGAGTAATCAAACAATCAACTGCACATTGTGGGACGATTATTCTGTGAGGTTTAACAAATTCATCCAGGAAAGGAAAGACACTAGACCAATTGTAGTTATGTTGAAATATGCTAAAATCAAAGAGGAAGGAAACTTCCCTCTTAGTGTTTCAAACACTTACAATCTGACAAAGCTTTATATCAATGAGGATGTCCCTGAAATTACCAACTTCATGAAATTGCTACCTCAAAATCAACTGATTGACCCTATGAACCAAATAGTTTGTACTCAATCTTCTCAAGCTTTGAGTCAATCTTCAAGCAGTTCACAATTTTCAAATCCTGACAATTTCATGAGAAATTCACTGCTTTTGCCTCTTGGTGATATAATTCAACTTCCCAAGGAATCTTATTGTGTCACTGTTGCTGATACTGTGAAAGTAAAGTCTACAAAACATGGTTGGTACTACCAAGCTTGCTGCAAATGCCCGAAAATAGCTAAGGGGGACAACCCTCCTTATATATGTGATAAAGACCATGAGACTGAGACTCAAATTTACAGGTACAAGCTAGAAGTTGAGGTTTCCTACGAAGATGCTAAAGCTACTTTTGTTTTCTGGGATCGTGAAGTTACGCAACTGCTGGGAATTACGGCTGCTCAACTAAGGGCTAACATGATCAAGGCTGGCGTCAAAAACCCATTAGAGTATCCACAGATAATTGAAACCATAAGTGAAAAAACCATGGTATTCAAGGTGAAATGGCAACCATATTGGAAAAATTGTTCTCTCATATGCATTAAAGAGGGAAAGCCTATAGTTGATATGATCAAGAGTAAATTTCCAAACCAAATGGTTAAGAACGAAGCTACAAATGATATTGAAATTGAGTCCATTCAATTAGTTGAAACATCTGTCACTTCTGAAAACAACCCTGAAGGTCTTTCCCAGTTAACTCCTACTAAGGGATTTGGTGATCTTCTCAAAGTGAATGACATTATGCAACTTGATGGAACTCCGTCTTCTAAGCTTCATGAGCACATTGAAATTGAAACAACTCCTTCTTCCAAACCTCCTCTCACAAGGATTGCATCAAGCAAGGCTTATCAGGCTCAAATCAATGCTGCAAAGAGTTCGTCATCAAAGAAAATGAAATTGGTGAAAACTGAAAAGATAGATTGA 1593 0.366 MARPFDFINDITDKTDFWKLAVKVKDKWNVRVKDKEHYEMVIIDAKVENKTYTLTNFQVLKNDIMFKACNHKYKLIWTGGTSIEEDTNHQIPEVVIKFKPFSDIVAGKWQPDLLVDVIGAVFEMGYQQLEKGSKPLQVNFLLTDLSNQTINCTLWDDYSVRFNKFIQERKDTRPIVVMLKYAKIKEEGNFPLSVSNTYNLTKLYINEDVPEITNFMKLLPQNQLIDPMNQIVCTQSSQALSQSSSSSQFSNPDNFMRNSLLLPLGDIIQLPKESYCVTVADTVKVKSTKHGWYYQACCKCPKIAKGDNPPYICDKDHETETQIYRYKLEVEVSYEDAKATFVFWDREVTQLLGITAAQLRANMIKAGVKNPLEYPQIIETISEKTMVFKVKWQPYWKNCSLICIKEGKPIVDMIKSKFPNQMVKNEATNDIEIESIQLVETSVTSENNPEGLSQLTPTKGFGDLLKVNDIMQLDGTPSSKLHEHIEIETTPSSKPPLTRIASSKAYQAQINAAKSSSSKKMKLVKTEKID* 531
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mal7g2829 530 CDD RPA1_DBD_B_like 116 220 - -
Mal7g2829 530 MobiDBLite consensus disorder prediction 511 530 - -
Mal7g2829 530 SUPERFAMILY Nucleic acid-binding proteins 97 223 IPR012340 -
Mal7g2829 530 Gene3D - 90 224 IPR012340 -
Mal7g2829 530 SUPERFAMILY Nucleic acid-binding proteins 271 393 IPR012340 -
Mal7g2829 530 Pfam Replication factor-A C terminal domain 288 392 IPR013955 -
Mal7g2829 530 Gene3D - 237 415 IPR012340 -
Mal7g2829 530 PANTHER RPA1 DOMAIN PROTEIN, PUTATIVE-RELATED 25 360 - -
Mal7g2829 530 SUPERFAMILY Nucleic acid-binding proteins 4 87 IPR012340 -
Mal7g2829 530 CDD RPA1_DBD_A_like 19 83 - -
Mal7g2829 530 PANTHER REPLICATION FACTOR A 1, RFA1 25 360 IPR004591 GO:0003677|GO:0005634|GO:0006260|GO:0006281|GO:0006310
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mal7g2829 Mal-Chr7 90823320 90826272 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mal7g2829 49 359 Core DNA Replication Machinery Family AT5G08020 23.839 1.34e-08 55.5
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mal7g2829 - - mtr:MTR_2g450060 501.901