Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mal7g2821 ATGAGGAAGCTAAAGTTTCCTGAGAAGAAGCTTTTGAAGAAGGTAAATTTTTGGGAATGGAAAAGAGAAGGGGGTCACCAAGAGAACATGGTTATGCAGCGCTACCATGTTACTGGACGAGATGATTACAAAAAGTATTATATTCAAGTTTATGCCAGAATCCAGATGGTCCAAAAGTTGGTAAACACAGTGAAACAGATGGACCCGAAAGATCCTATTCGAATTGATATGACTGATAAGCTTTTGGAAAAACTTTACAACATGGGTGTGATTCCAACCAGGGAAAGCATCAAGCTATGTGAGCGCTTAACAGTGTCATCCTTCTGCAGAAGGCTCTCATCTGTTTTGATGCGTCTAAAATTTGCTGAGCATCTGAAAGAAGCCGTTACATATATTGAGCAAGGGCATGTACGAGTTGGTATAGATACAGTTACAGACCCAGCTTTCCTTGTAACTAGAAACATGGAAGACTTAATTACATGGGTTGATTCATCCAAGATAAAGAGAAAGGTGCTTCAGTACAATGACAAGTTGGATGACTATGATTTAATGAATTGA 558 0.3907 MRKLKFPEKKLLKKVNFWEWKREGGHQENMVMQRYHVTGRDDYKKYYIQVYARIQMVQKLVNTVKQMDPKDPIRIDMTDKLLEKLYNMGVIPTRESIKLCERLTVSSFCRRLSSVLMRLKFAEHLKEAVTYIEQGHVRVGIDTVTDPAFLVTRNMEDLITWVDSSKIKRKVLQYNDKLDDYDLMN* 186
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mal7g2821 185 PANTHER 30S 40S RIBOSOMAL PROTEIN 1 184 IPR022801 -
Mal7g2821 185 SMART Ribosomal_S4_2 3 110 IPR001912 GO:0019843
Mal7g2821 185 CDD S4 110 171 - -
Mal7g2821 185 Pfam Ribosomal protein S4/S9 N-terminal domain 3 110 IPR001912 GO:0019843
Mal7g2821 185 SMART s4_6 110 173 IPR002942 GO:0003723
Mal7g2821 185 ProSiteProfiles S4 RNA-binding domain profile. 110 176 - -
Mal7g2821 185 SUPERFAMILY Alpha-L RNA-binding motif 28 178 - -
Mal7g2821 185 Gene3D - 110 185 IPR036986 GO:0003723
Mal7g2821 185 PANTHER U3 SMALL NUCLEOLAR RIBONUCLEOPROTEIN PROTEIN IMP3 1 184 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mal7g2821 Mal-Chr7 90718390 90721592 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mal7g2821 67 151 Cytoplasmic Ribosomal Protein Gene Family AT5G39850 32.184 8.82e-07 45.4