Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mal7g2805 ATGGATTACCATTACATTACAGAAAATGACATATTTTCTACCAAGTTTGCAACTACACATCATCACAACTTCTCTGTTTTGAGTGAATCTGACATAAAGCGTCTTCAAGATACTGACATCAATCGCGTCTTATCGGTTCTCTCCACATCAAGATCTGTTGCATGCCTTTTACTCACCAACTACAATTGGAGCGTCACTAACGCTTTGGAATCATGGTTTGATAACCAACAAAATGTTCAAAAATCCATTGGCTTATCCCAAAAAATTGAATTAGGGTTTCCTAATTCTAATACAGAAATTCACACATGTGATATCTGTTTTGAAACCTTTGCTAGTGACAAAATCAAGTCATCATGGTGTGGTCATCCATTTTGCATCAATTGCTGGAATCAATATGTTGATACCAATATTGCTGATCATAATTGCTTCAAGCTTAAATGCCCTCAACCTTCTTGTAATGCAGCTGTAGGTGAAGACATGATTCATCAACTAGCAAGTGAATCAAGTAAGATTAAATATGATCAATTTCTGTTTAGATCTTATGTGGAAAACAACACCAACATGAAATTGAAATGGTGTCCTGCTCCAAATTGTTGTTATGCTATAAGCTATGATAATGAACAAGATGATGATGGTTCTAGTTCTAGAAATAATTTTAATTATGATGTTACATGTCATTGTTATCATAGCTTTTGTTGGAATTGTGGTGAAGATGCTCATGCACCTTTGAATTGTGAAACTGTTGCTGAATGGATGAAAAAGATTAATTCTGAATTTAAGATCACCACTACTGGTTGGATTATTGCCAACACTAAACCATGTCCTAATTGTAAGATACCTATTGAGAAAAACAATGGGTGTAATCATATGACATGCAAATGTGGATTCCAATTTTGTTGGTCATGTCTCCGTGATCCGTCTACTTGTCGTAGTTCAGCATGTTGCTACATTTCTAACGACGTAGAATTTGATGTATTTGAAGATGAAATGCAAAGAAACCATCCAAAAAATCAATTGGACAGGTACACTTACTATCATCAAGGTTGGGCTAACAATGAAATAGCAAGAAAAAAGGCTCTTCAAAATTTAATTGAGATGAGTACTTTGCATCACAAGAGACCAAGTAGTATAACAAGGAAAATGGCTGAAAATTATTTTTATTACATAAATGATGCACTGAGACACATAGTTGAATGTAGAAGAATTCTCAAATGGAGTTTTGTGTATGGATATTATCTTTCTGACAATGAAAATGCTAAGATTGAGTTCTTTGATCACATCATAGACACAGCTCAATTTGTGTTGGATAGGCTTCATCATTTTGCAGAAAATGAATTAAGAAAGGCTCTAAATGATGGGTCAGAAGAAAAATTTCATGATTCTCGGTTGAAGCTAATCACTTTGACTAGGGTGACTAAAAGTTATTTTATGAATTTGGTTAATGAATTGGAGAATGATCATGACATTGTGCATGTGAAAAACTATACTGGCGTGAAAAGTGAGTCAAGAGAAATTGGTGAGAACTCATTAAGAAGATTGAATACTAGAAGGCTAAGAATGTAG 1563 0.3417 MDYHYITENDIFSTKFATTHHHNFSVLSESDIKRLQDTDINRVLSVLSTSRSVACLLLTNYNWSVTNALESWFDNQQNVQKSIGLSQKIELGFPNSNTEIHTCDICFETFASDKIKSSWCGHPFCINCWNQYVDTNIADHNCFKLKCPQPSCNAAVGEDMIHQLASESSKIKYDQFLFRSYVENNTNMKLKWCPAPNCCYAISYDNEQDDDGSSSRNNFNYDVTCHCYHSFCWNCGEDAHAPLNCETVAEWMKKINSEFKITTTGWIIANTKPCPNCKIPIEKNNGCNHMTCKCGFQFCWSCLRDPSTCRSSACCYISNDVEFDVFEDEMQRNHPKNQLDRYTYYHQGWANNEIARKKALQNLIEMSTLHHKRPSSITRKMAENYFYYINDALRHIVECRRILKWSFVYGYYLSDNENAKIEFFDHIIDTAQFVLDRLHHFAENELRKALNDGSEEKFHDSRLKLITLTRVTKSYFMNLVNELENDHDIVHVKNYTGVKSESREIGENSLRRLNTRRLRM* 521
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mal7g2805 520 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 97 185 IPR013083 -
Mal7g2805 520 ProSiteProfiles TRIAD supradomain profile. 99 318 IPR044066 -
Mal7g2805 520 ProSiteProfiles Zinc finger RING-type profile. 103 148 IPR001841 -
Mal7g2805 520 SMART ibrneu5 260 309 IPR002867 -
Mal7g2805 520 SMART ibrneu5 171 245 IPR002867 -
Mal7g2805 520 Pfam IBR domain, a half RING-finger domain 172 245 IPR002867 -
Mal7g2805 520 Pfam IBR domain, a half RING-finger domain 269 305 IPR002867 -
Mal7g2805 520 PANTHER RBR FAMILY RING FINGER AND IBR DOMAIN-CONTAINING 23 500 IPR031127 GO:0004842|GO:0016567
Mal7g2805 520 Gene3D - 241 489 - -
Mal7g2805 520 PANTHER RBR-TYPE E3 UBIQUITIN TRANSFERASE 23 500 - -
Mal7g2805 520 SUPERFAMILY RING/U-box 266 312 - -
Mal7g2805 520 SUPERFAMILY RING/U-box 172 252 - -
Mal7g2805 520 SUPERFAMILY RING/U-box 98 183 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mal7g2805 Mal-Chr7 90473307 90474869 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mal7g2805 20 506 ARIADNE family AT1G65430 43.662 4.65e-135 401
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mal7g2805 K11968 - gmx:100801350 448.358