Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mal7g2799 ATGCCTAAATCAAGCAAGAAATCCGCAACCAAAGCTGATGCTGCTCCTGTTGTTGTTTCTCCAGTGAAGTCTGGAAAGAAAGGCAAGAGGCAGGCTGAGGAAGAAGTCAAGGCAGTGAGTGCAAAGAAGCAAAAGGTAGCAGAGGTTGCCGCCAAGCAAAAGACATTGAAAGTAGTCAAGAAGGAGGAAAGTAGTTCGGAGGACGATTCCTCTGATGAATCTGAGGACGAGCCTGTTGCAAAAGCTCCCGCTCCTTCAAAAAAGACACCAGCTAAAAATGGGAATGTAAAGAAAGCAAAGCCAGAGTCCAGTTCAGGGGAATCTGATTCCGATGACGACTCCTCTTCTGATGAGGAAGAAAAACCTGTCGCCAAAGCTGTTCCATCTAAAAATGGAAGTGCACCTGCAAAGAAAGCTGATAGTTCTGATGAAGATGAAGATTCTGATGAATCTTCTGATGAAGACGAGAAACCTGCAGCAAAAGCTGCAGCAAAACCTGTTCCTTCTAAAAATGGGAGTGCACCCTCGAAGAAAGCTGCTAGTTCTTCTGATGATGATGGCGATTCTGATGAAGAAGAATCTGATGAAGATGAGAAACCTGCAGCAAAAGCCGTTCTTTCTAAAAACGTGAGTGCGCCCACAAAGAAAGCTGTTAGTTCTGAAGAATCTTCAGAAGATGAAGAATCTGAGGAAGATGAAGCTCCAAAGCCCAAGGCTGTCCCTTCTGTCGGCAAGAACGGATCTGCTTCTGCAAAGAAGCCAGCTGAAAGCTCTGACTCTGATAGCTCTGATAGCTCTGATGACGAGGATACAAAGCCTGCTGCACCTGCTGTTGCAAAAAAGAGTAAGGAAGATAGCTCAGATTCTGATGATGAAGATGATGATAGCAGCTCTGATGAAGACAATAAAACTTCAAATGCTTCTAATGGTAACAAGAAACCTGTGGCTGTTGCTAAGAAAGAGGTTAGTGAATCGGAAAGTGATTCGTCTGATGACGAGGATAAGATGGATGTTGACAAGGATGGTAGCGATGATAGTTCTGACGATGAAGAGGAGAGTGAGGAGGAACCATCTAAGACGCCTCAGAAAAAGGTCAAGGATGTGGAGATGGTTGATGCTGGCATATCTGGGAAAAAAGCTCCTAATACCCCAGCCACACCAAGTGAGAACAGTGGTTCAAAGACATTATTTGTTGGGAACTTATCATTTAGTGTGGAACGATCTCACATAGAGAGTTTCTTCCAAGATTGTGGAGAGGTTGTTGATGTTCGTCTTGCTTCGGATGAGGATGGAAGGTTTAAAGGCTTTGGACATGTTGAGTTTGCAACTGCAGAGGCAGCCCAAAGCGCACTTGAGATGAATGGGCAAGAATTGTTGAACCGTGCTGTCCGACTTGATTTAGCTCGGGAGAGGGGGGCTTTTACTCCTAATAATAACAGCAACTACTCAGCCCAAAGCGGTGGAAGAGGCCAGTCTCAAACAATATATGTCAGGGGTTTTGATAAGAATCTTGGGGAGGATGAGATAAGAGCAAAATTGGAGGAGCATTTTGGTACTTGTGGGGAAGTTACAAGGGTGTCAATCCCAAAAGATTTTGAATCTGGTTATTCCAAGGGGTTTGCATACATGGACTTCAAAGATTCCAGCAGCTTGAACAAAGCTTTTGAACTCAATGGATCTGAGCTTGATGGCTATTCTTTGACAGTGGATGAAGCCAAACCTAGAGATAGTCAAGGTTCTGGTGGTAGAGGTGGAGGTGGAAGGAGTGGTGGTGGTCGATTTGGTGGTGGTGGAAGGAGCGGGGGTTTTGGTGGAAGGAGCGGGGGAAGAGGAGGTCGGTTTGGTGGAAGGGATGGTGGCGGTAGAGGTGGCCGAGGAGGAAGAGGTGGTCGTGGAGGATTCAATAAACCAAGTTTTGCTTCTGAAGGGAAAAAGACTACTTTTGCCGACGACTAG 1956 0.4565 MPKSSKKSATKADAAPVVVSPVKSGKKGKRQAEEEVKAVSAKKQKVAEVAAKQKTLKVVKKEESSSEDDSSDESEDEPVAKAPAPSKKTPAKNGNVKKAKPESSSGESDSDDDSSSDEEEKPVAKAVPSKNGSAPAKKADSSDEDEDSDESSDEDEKPAAKAAAKPVPSKNGSAPSKKAASSSDDDGDSDEEESDEDEKPAAKAVLSKNVSAPTKKAVSSEESSEDEESEEDEAPKPKAVPSVGKNGSASAKKPAESSDSDSSDSSDDEDTKPAAPAVAKKSKEDSSDSDDEDDDSSSDEDNKTSNASNGNKKPVAVAKKEVSESESDSSDDEDKMDVDKDGSDDSSDDEEESEEEPSKTPQKKVKDVEMVDAGISGKKAPNTPATPSENSGSKTLFVGNLSFSVERSHIESFFQDCGEVVDVRLASDEDGRFKGFGHVEFATAEAAQSALEMNGQELLNRAVRLDLARERGAFTPNNNSNYSAQSGGRGQSQTIYVRGFDKNLGEDEIRAKLEEHFGTCGEVTRVSIPKDFESGYSKGFAYMDFKDSSSLNKAFELNGSELDGYSLTVDEAKPRDSQGSGGRGGGGRSGGGRFGGGGRSGGFGGRSGGRGGRFGGRDGGGRGGRGGRGGRGGFNKPSFASEGKKTTFADD* 652
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mal7g2799 651 ProSiteProfiles Eukaryotic RNA Recognition Motif (RRM) profile. 493 574 IPR000504 GO:0003723
Mal7g2799 651 Coils Coil 29 49 - -
Mal7g2799 651 MobiDBLite consensus disorder prediction 375 394 - -
Mal7g2799 651 SUPERFAMILY RNA-binding domain, RBD 492 604 IPR035979 GO:0003676
Mal7g2799 651 SUPERFAMILY RNA-binding domain, RBD 382 491 IPR035979 GO:0003676
Mal7g2799 651 Gene3D - 316 476 IPR012677 -
Mal7g2799 651 PANTHER BNAA08G02930D PROTEIN 243 646 - -
Mal7g2799 651 MobiDBLite consensus disorder prediction 327 355 - -
Mal7g2799 651 ProSiteProfiles Eukaryotic RNA Recognition Motif (RRM) profile. 394 470 IPR000504 GO:0003723
Mal7g2799 651 CDD RRM1_NUCLs 395 471 IPR034349 -
Mal7g2799 651 Pfam RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) 396 463 IPR000504 GO:0003723
Mal7g2799 651 Pfam RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) 502 567 IPR000504 GO:0003723
Mal7g2799 651 PANTHER EUKARYOTIC TRANSLATION INITIATION FACTOR 4B/4H 243 646 - -
Mal7g2799 651 MobiDBLite consensus disorder prediction 569 651 - -
Mal7g2799 651 MobiDBLite consensus disorder prediction 1 369 - -
Mal7g2799 651 SMART rrm1_1 494 570 IPR000504 GO:0003723
Mal7g2799 651 SMART rrm1_1 395 466 IPR000504 GO:0003723
Mal7g2799 651 MobiDBLite consensus disorder prediction 267 287 - -
Mal7g2799 651 Gene3D - 477 592 IPR012677 -
Mal7g2799 651 MobiDBLite consensus disorder prediction 26 67 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mal7g2799 Mal-Chr7 90398627 90403426 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mal7g2799 391 563 Eukaryotic Initiation Factors Gene Family AT4G34110 30.857 9.59e-13 69.3
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mal7g2799 K11294 - gmx:100786132 402.905