Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mal7g2779 ATGGTTATTCAGTTTAAGCAACAGCTTATTGTAAATAGTTTCAAGACCATTGATGGAAAAAATTTAACCATGTTGAATCTTTCGACCAACAATTTTACTGGAGCTATCGCTATTGAAATGGGATCCATTTCAAAGCTTAAAGGATTGTACTTGGGACGAAACAACTTTTCAACAGATATTCCTGAGACTCTTTTGAAATTGAATACTTTAGTTTTCTTGGATTTCAGCAGAAACAAATTTGGTGGTCACATACAAAAGACTTTTGGAAAATTTAAACAAGTCAGATTTCTTCTATTGCACTCCAACTCCTGCACTGGCTGCATTACAATACACTATGTTACCAATGTTATCATTCATGGCCTTCATAATCATGATTGTAAACAAACTGGTAATGCTATGGTCAGAGGCTCAGAAACAAATTTTGTTTCGAGAAATATGGCTGATGGTGATGCTGTTTCTATATTTGGTTTAGGTCAAATTTGGGTTGATTATAAATCTTTGTTTTATTAG 510 0.3333 MVIQFKQQLIVNSFKTIDGKNLTMLNLSTNNFTGAIAIEMGSISKLKGLYLGRNNFSTDIPETLLKLNTLVFLDFSRNKFGGHIQKTFGKFKQVRFLLLHSNSCTGCITIHYVTNVIIHGLHNHDCKQTGNAMVRGSETNFVSRNMADGDAVSIFGLGQIWVDYKSLFY* 170
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mal7g2779 169 PANTHER PECTATE LYASE 104 167 - -
Mal7g2779 169 PANTHER PECTATE LYASE 1 23 - -
Mal7g2779 169 Gene3D Ribonuclease Inhibitor 7 102 IPR032675 -
Mal7g2779 169 SUPERFAMILY Pectin lyase-like 1 164 IPR011050 -
Mal7g2779 169 SUPERFAMILY L domain-like 20 109 - -
Mal7g2779 169 PANTHER PECTATE LYASE 18-RELATED 1 23 IPR045032 GO:0030570
Mal7g2779 169 PANTHER PECTATE LYASE 18-RELATED 104 167 IPR045032 GO:0030570
Mal7g2779 169 Gene3D - 103 168 IPR012334 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mal7g2779 Mal-Chr7 90066483 90067210 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mal7g2779 106 169 Polysaccharide Lyase AT1G04680 68.750 1.41e-25 99.4
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mal7g2779 - - qsu:112031433 125.946