Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mal7g2740 ATGACACAATGGCAAATTCTTGGTGTAAGGTTCTTTAGAACATTTGGAAAAATGGATAATTTTGTGCATACAATACAAATACAACAATTACATGAGAATAGAGAATTTTTACAATCTATTGCTCGAAATAATAATAATAATAATAATAATAATGCATTGTCTATGATGGAAAATAGAAATAATTCATGGTCTATGAGAGAAAGGGGACATTACATAGCAGATTCACAGATCAATATGTCTTTTGGCACGATTGCGGAGATTGCTAGGTGCGCGATAAGATCATTGCCGCCGGTTAATAGTTTTGATGGTGACGAAAACACGGATTGTCCTATTTGCATGGATGAATTCACAAAAGGCGAGTTGATTCAATCATTTGGAGTGTGTGCGCATGAATTTCATACCTCGTGTCTCAACTCGTGGTTACTCGGAGGAAAAACTACTTGTCCGGTTTGTCGTCATGATTTGTATCATGATTTGTCTGTTAATACTTAA 492 0.3516 MTQWQILGVRFFRTFGKMDNFVHTIQIQQLHENREFLQSIARNNNNNNNNNALSMMENRNNSWSMRERGHYIADSQINMSFGTIAEIARCAIRSLPPVNSFDGDENTDCPICMDEFTKGELIQSFGVCAHEFHTSCLNSWLLGGKTTCPVCRHDLYHDLSVNT* 164
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mal7g2740 163 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 71 157 IPR013083 -
Mal7g2740 163 ProSiteProfiles Zinc finger RING-type profile. 109 152 IPR001841 -
Mal7g2740 163 SMART ring_2 109 151 IPR001841 -
Mal7g2740 163 Pfam Ring finger domain 108 152 IPR001841 -
Mal7g2740 163 SUPERFAMILY RING/U-box 99 158 - -
Mal7g2740 163 PANTHER RING FINGER DOMAIN-CONTAINING 20 157 - -
Mal7g2740 163 PANTHER ZINC FINGER, C3HC4 TYPE (RING FINGER) PROTEIN 20 157 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mal7g2740 Mal-Chr7 89632278 89632882 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mal7g2740 102 152 C3H Transcription Factor Family AT4G38140 43.137 6.52e-11 55.5
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mal7g2740 - K22378 mtr:MTR_4g073810 239.965