Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mal7g2660 ATGTTGATAACGCTGAAAACACCGAACACATATCGTTTTCAAATATCAGACTCTCAGAATGGATGGTGCAGCAGTGCAAGGAAATCGGGGCGGGTGCAACAACACTGCATCCCGAAGATTCTAGAAGGCCGTCATGTAATTGGAATCGACGAGACTAGTAGCGGTAAAACGGCAGCTTTTGCGCTTCCTATTCTTCAATGCCTCGCCGAGAATCCTTCTGGTGTGTTTGCTCTCGTGCTGACGTGCACGCGTGAGCTTGCGTTTCAGCTGATGTACCAGTTCCAGGGCCTTGTGGGGCCCTCACTTGGCTTCACTCATACCGTCGTTGTGGGTGGTTCAAACATTCGTAAGCAGGCCTCAAGTTGTTTTCGCCACTCCCGTGAGACTCAAAGTTTTGCTTCAGGATAA 408 0.4975 MLITLKTPNTYRFQISDSQNGWCSSARKSGRVQQHCIPKILEGRHVIGIDETSSGKTAAFALPILQCLAENPSGVFALVLTCTRELAFQLMYQFQGLVGPSLGFTHTVVVGGSNIRKQASSCFRHSRETQSFASG* 136
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mal7g2660 135 PANTHER RNA HELICASE 27 121 - -
Mal7g2660 135 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 31 121 IPR027417 -
Mal7g2660 135 Gene3D - 18 129 IPR027417 -
Mal7g2660 135 Pfam DEAD/DEAH box helicase 31 121 IPR011545 GO:0003676|GO:0005524
Mal7g2660 135 ProSiteProfiles Superfamilies 1 and 2 helicase ATP-binding type-1 domain profile. 37 118 IPR014001 -
Mal7g2660 135 PANTHER ATP-DEPENDENT RNA HELICASE DDX49-RELATED 27 121 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mal7g2660 Mal-Chr7 88613719 88614126 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mal7g2660 32 116 Eukaryotic Initiation Factors Gene Family AT5G11200 40.000 1.49e-10 55.8
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mal7g2660 K14778 - gmx:100804060 112.079