Gene search
Sequence information
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Mal7g2660 | ATGTTGATAACGCTGAAAACACCGAACACATATCGTTTTCAAATATCAGACTCTCAGAATGGATGGTGCAGCAGTGCAAGGAAATCGGGGCGGGTGCAACAACACTGCATCCCGAAGATTCTAGAAGGCCGTCATGTAATTGGAATCGACGAGACTAGTAGCGGTAAAACGGCAGCTTTTGCGCTTCCTATTCTTCAATGCCTCGCCGAGAATCCTTCTGGTGTGTTTGCTCTCGTGCTGACGTGCACGCGTGAGCTTGCGTTTCAGCTGATGTACCAGTTCCAGGGCCTTGTGGGGCCCTCACTTGGCTTCACTCATACCGTCGTTGTGGGTGGTTCAAACATTCGTAAGCAGGCCTCAAGTTGTTTTCGCCACTCCCGTGAGACTCAAAGTTTTGCTTCAGGATAA | 408 | 0.4975 | MLITLKTPNTYRFQISDSQNGWCSSARKSGRVQQHCIPKILEGRHVIGIDETSSGKTAAFALPILQCLAENPSGVFALVLTCTRELAFQLMYQFQGLVGPSLGFTHTVVVGGSNIRKQASSCFRHSRETQSFASG* | 136 |
Annotation information
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Mal7g2660 | 135 | PANTHER | RNA HELICASE | 27 | 121 | - | - | |
| Mal7g2660 | 135 | SUPERFAMILY | P-loop containing nucleoside triphosphate hydrolases | 31 | 121 | IPR027417 | - | |
| Mal7g2660 | 135 | Gene3D | - | 18 | 129 | IPR027417 | - | |
| Mal7g2660 | 135 | Pfam | DEAD/DEAH box helicase | 31 | 121 | IPR011545 | GO:0003676|GO:0005524 | |
| Mal7g2660 | 135 | ProSiteProfiles | Superfamilies 1 and 2 helicase ATP-binding type-1 domain profile. | 37 | 118 | IPR014001 | - | |
| Mal7g2660 | 135 | PANTHER | ATP-DEPENDENT RNA HELICASE DDX49-RELATED | 27 | 121 | - | - |
Duplication type information
| Select | Gene | Chromosome | Start | End | Duplicated_type |
|---|---|---|---|---|---|
| Mal7g2660 | Mal-Chr7 | 88613719 | 88614126 | Tandem |
Functional genes information
| Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
|---|---|---|---|---|---|---|---|---|
| Mal7g2660 | 32 | 116 | Eukaryotic Initiation Factors Gene Family | AT5G11200 | 40.000 | 1.49e-10 | 55.8 |