Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mal7g2620 ATGGAAGTTGTGGTAGCGAAAGCGTTGAAAACAAGCTTGAGGACAGAGTCTATTTTCCAGCAAACAATTTGCGAGGAAATTTTGTGTTTGAACGCAAACAACGTTGTTGTCGGTGAAGATTTTTCTGTTGACGACTTGCTTGATTTTTCAAACGGAGAATTTCAACATGGCTCCGTCGGAAAAGAAATTGTTGTTTACCAAGAAGAAGAAGAAGAACATGAGAAAAACAGCACCACCTCAGGCTCTGAACATGACCGAACAGAAGACGACGGTAATTCTAATTCCACAACTTTTTCCGGCACCGGCGACGGCGAGTCTGACTCCATTTTTCCCGGTGGTTTAGCAGTTCCGGCTGATGATGTTGCGGATTTGGAATGGGTATCTCACTTTGTGGACGATTCTCTACCGGAACTCTCTATGTTGTATCCAGTTCAGGCCCGGGCCGAACCAGAACCTAGACCGGGCCCAACCAAAACTTCTCAACTCTCTTTAATCCGCAGAAAGCCCAGAACAACCAAGACAAGAAGGCCCAACTGTAACACATGGGTTTTCAACCCCATACTCTGTTCAGCGAAGAAGCAGAGGAAAAAGCCCGAGGCCCAAACGGGTGGAGCCCAGTTTCAACGACGGTGCAGCCACTGCCAGGTTCAGAAAACTCCACAGTGGAGAGCCGGTCCGCTTGGACCCAAAACACTATGTAACGCTTGCGGGGTTCGGTTTAAGTCCGGTCGGCTTTTCCCTGAGTATAGACCAGCGTGCAGCCCAACGTTTTCCGGTGATATTCATTCGAACAGCCACCGGAAGGTTTTGGAGATGAGGCGGAGGAAGGAGACGGATGAACCGATTTCCGGTCTGAACCGGAGTCAAATGGTTACTAGTTGGTGA 885 0.4881 MEVVVAKALKTSLRTESIFQQTICEEILCLNANNVVVGEDFSVDDLLDFSNGEFQHGSVGKEIVVYQEEEEEHEKNSTTSGSEHDRTEDDGNSNSTTFSGTGDGESDSIFPGGLAVPADDVADLEWVSHFVDDSLPELSMLYPVQARAEPEPRPGPTKTSQLSLIRRKPRTTKTRRPNCNTWVFNPILCSAKKQRKKPEAQTGGAQFQRRCSHCQVQKTPQWRAGPLGPKTLCNACGVRFKSGRLFPEYRPACSPTFSGDIHSNSHRKVLEMRRRKETDEPISGLNRSQMVTSW* 295
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mal7g2620 294 SMART GATA_3 205 259 IPR000679 GO:0006355|GO:0043565
Mal7g2620 294 PANTHER GATA TRANSCRIPTION FACTOR 1 189 - -
Mal7g2620 294 PANTHER GATA TRANSCRIPTION FACTOR 190 294 - -
Mal7g2620 294 CDD ZnF_GATA 210 267 IPR000679 GO:0006355|GO:0043565
Mal7g2620 294 PANTHER GATA TRANSCRIPTION FACTOR 1 189 - -
Mal7g2620 294 PANTHER GATA TRANSCRIPTION FACTOR 190 294 - -
Mal7g2620 294 MobiDBLite consensus disorder prediction 146 176 - -
Mal7g2620 294 SUPERFAMILY Glucocorticoid receptor-like (DNA-binding domain) 208 268 - -
Mal7g2620 294 MobiDBLite consensus disorder prediction 68 114 - -
Mal7g2620 294 ProSitePatterns GATA-type zinc finger domain. 211 236 IPR000679 GO:0006355|GO:0043565
Mal7g2620 294 Gene3D - 206 288 IPR013088 GO:0006355|GO:0008270
Mal7g2620 294 MobiDBLite consensus disorder prediction 274 294 - -
Mal7g2620 294 Pfam GATA zinc finger 211 244 IPR000679 GO:0006355|GO:0043565
Mal7g2620 294 PIRSF Txn_fac_GATA_plant 9 293 IPR016679 GO:0003677|GO:0005634|GO:0045893
Mal7g2620 294 ProSiteProfiles GATA-type zinc finger domain profile. 209 241 IPR000679 GO:0006355|GO:0043565
Mal7g2620 294 MobiDBLite consensus disorder prediction 68 91 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mal7g2620 Mal-Chr7 88170194 88171362 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mal7g2620 40 279 C2C2-Gata Transcription Factor Family AT4G36240 47.244 3.27e-57 182
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF C2C2-GATA Mal7g2620 GATA 1.5e-16 CL0167
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mal7g2620 - - gmx:100776188 365.54
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mal7g2620 7 88170194 88171362 Mal7g2620 7 88170194 88171362 ECH