Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mal7g2607 ATGAAGATCCAGTGTGATGCATGTCAAAAACAAGAAGCCTCATTGTTCTGCCCTGCAGATGAAGCAGCTCTCTGCAATCAATGTGATCACAATATCCATTATGCCAACAAGCTCGCTGCCAAACACAAACGCTTCTCTCTTCACCGTCCCACTTCCAAAGACTCCCCTCTCTGTGATATCTGCAAGGAGAGGCGTGCATATTTATTTTGCAAAGAAGACAGAGCAATACTTTGCAGAGAATGTGACATTCCTATCCATAAAATCAATGAACTTACCAAGAAACACAACAGGTTTCTCCTCACAGGTGTAAAGATCGGTGCTTCTTCTTCTTATTCAAACCCAACAACTTCCAATGGCTCGGAAGTAAGAACCTCAAGTTCAAGACCAAGTTCGTTTTCAAGTCAAAATAATAGTTGTTCTCGAAGTTCTTTCAAAGAGAACATGACTTGTGAGACAGTTTCAACCAGTAGCATTTCTGAATACTTGATTGAAACAATTCCTGGTTACTGCATGGAAGAGCTTTTTGATGCTTCTTTTGCACCTAATAATGTTTTCTGTAAGGTAATTAGTAATATACAGTGCACTTTTTTTTTTTCCTAG 600 0.3933 MKIQCDACQKQEASLFCPADEAALCNQCDHNIHYANKLAAKHKRFSLHRPTSKDSPLCDICKERRAYLFCKEDRAILCRECDIPIHKINELTKKHNRFLLTGVKIGASSSYSNPTTSNGSEVRTSSSRPSSFSSQNNSCSRSSFKENMTCETVSTSSISEYLIETIPGYCMEELFDASFAPNNVFCKVISNIQCTFFFS* 200
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mal7g2607 199 SMART bboxneu5 53 100 IPR000315 GO:0008270
Mal7g2607 199 SMART bboxneu5 4 47 IPR000315 GO:0008270
Mal7g2607 199 Gene3D Classic Zinc Finger 1 95 - -
Mal7g2607 199 ProSiteProfiles Zinc finger B-box type profile. 1 47 IPR000315 GO:0008270
Mal7g2607 199 ProSiteProfiles Zinc finger B-box type profile. 53 100 IPR000315 GO:0008270
Mal7g2607 199 CDD Bbox1_BBX-like 57 100 - -
Mal7g2607 199 MobiDBLite consensus disorder prediction 109 142 - -
Mal7g2607 199 Pfam B-box zinc finger 55 96 IPR000315 GO:0008270
Mal7g2607 199 Pfam B-box zinc finger 4 44 IPR000315 GO:0008270
Mal7g2607 199 CDD Bbox1_BBX-like 5 47 - -
Mal7g2607 199 PANTHER B-BOX ZINC FINGER PROTEIN 20 1 188 - -
Mal7g2607 199 PANTHER B-BOX ZINC FINGER PROTEIN 22 1 188 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mal7g2607 Mal-Chr7 87920695 87921581 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mal7g2607 1 176 C2C2-CO-like Transcription Factor Family AT4G39070 54.000 3.48e-61 189
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF DBB Mal7g2607 zf-B_box 5.1e-08 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mal7g2607 - - gmx:100790232 246.899
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mal7g2607 7 87920695 87921581 Mal7g2607 7 87920695 87921581 ECH
Mal7g2607 7 87920695 87921581 Mal6g1060 6 15958945 15961228 ECH